RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CDS1Q92903 461 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 FAM162AQ96A26 154 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 EFHD2Q96C19 240 aaPredicted RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 OMA1Q96E52 524 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 SLC47A1Q96FL8 570 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 PLEKHA8Q96JA3 519 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 COG8Q96MW5 612 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 MUS81Q96NY9 551 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 MS4A4EQ96PG1 132 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 SEPHS2Q99611 448 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 RSPO3Q9BXY4 272 aaPredicted RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 TRIM8Q9BZR9 551 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 DUSP21Q9H596 190 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 C3orf14Q9HBI5 128 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 ZCCHC3Q9NUD5 404 aaKnown RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 PLCXD1Q9NUJ7 323 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 ATAD3AQ9NVI7 634 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 GMPR2Q9P2T1 348 aaKnown RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 PAIP2BQ9ULR5 123 aaKnown RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 SNX8Q9Y5X2 465 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 NPFFR2Q9Y5X5 522 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 CELSR1Q9NYQ6 3014 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 CSMD2Q7Z408 3487 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 VPS13CQ709C8 3753 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 NPIPA5A0A0B4J1W7 369 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 PNMA8CA0A1B0GUJ8 204 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 OR6C70A6NIJ9 312 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 CLDN24A6NM45 220 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 FIGNL2A6NMB9 653 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 NPIPA7E9PJI5 369 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 NPIPB9F8W1W9 429 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 M0R3G1 203 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 HMGN4O00479 90 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 AQP7O14520 342 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 TFECO14948 347 aaPredicted RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ADAMDEC1O15204 470 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 OIP5O43482 229 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 FADS1O60427 444 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 WDR1O75083 606 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ICOSLGO75144 302 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 TRIM3O75382 744 aaPredicted RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 E2F6O75461 281 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 GLSO94925 669 aaPredicted RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 KCNK2O95069 426 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 GOSR1O95249 250 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 SNAP29O95721 258 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 IL33O95760 270 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 HNRNPCP07910 306 aaKnown RBP eCLIP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 CELA3AP09093 270 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 NUDT7P0C024 238 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 RFPL3SP0C7P2 107 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 NPIPA8P0DM63 369 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 OR12D1P0DN82 309 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ANXA8P13928 327 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 FPR1P21462 350 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 UQCRC2P22695 453 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ACVR2AP27037 513 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 PCSK6P29122 969 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 CD40LGP29965 261 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 SOAT1P35610 550 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 RANBP1P43487 201 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 PCYT1AP49585 367 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 MEOX1P50221 254 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 PNLIPRP2P54317 469 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 COPZ1P61923 177 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 PLAURQ03405 335 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 PLCXD2Q0VAA5 305 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 GANABQ14697 944 aaKnown RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 SLC10A1Q14973 349 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ZNHIT3Q15649 155 aaPredicted RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 EIF2S3LQ2VIR3 472 aaKnown RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 SPDYE7PQ495Y7 208 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 CYP27C1Q4G0S4 372 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 CCNJQ5T5M9 372 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 SYT6Q5T7P8 510 aaPredicted RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 GPR107Q5VW38 600 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 OR2T5Q6IEZ7 315 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 SLC30A6Q6NXT4 461 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 CDC73Q6P1J9 531 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 TNFAIP8L2Q6P589 184 aaPredicted RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 FIGNL1Q6PIW4 674 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF621Q6ZSS3 439 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 EIF3MQ7L2H7 374 aaKnown RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 PRSS48Q7RTY5 328 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 SZRD1Q7Z422 152 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 FGD2Q7Z6J4 655 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 HMGN2P46Q86SG4 172 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 RNF130Q86XS8 419 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 DEPDC4Q8N2C3 294 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 OR2M7Q8NG81 312 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 OR56A1Q8NGH5 318 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 OR2T29Q8NH02 315 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 OR10A6Q8NH74 314 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 PRR7Q8TB68 274 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 TBC1D15Q8TC07 691 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ZFP90Q8TF47 636 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ASB5Q8WWX0 329 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 FIG4Q92562 907 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 SLC9A6Q92581 669 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 RAB8BQ92930 207 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms