RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 IQCGQ9H095 443 aaKnown RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 ZNF665Q9H7R5 613 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 POLE3Q9NRF9 147 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 PGPEP1Q9NXJ5 209 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 ZNF346Q9UL40 294 aaKnown RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 ZNF232Q9UNY5 417 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 RNF11Q9Y3C5 154 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 RYR3Q15413 4870 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 DNAJC9-AS1A6NH13 148 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 ATP6V1G2-DDX39BF2Z307 99 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 hCG_2039718K7EN88 272 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 PGRMC1O00264 195 aaKnown RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 ZNF208O43345 1280 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 EIF1BO60739 113 aaKnown RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 KLHL2O95198 593 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 H6PDO95479 791 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 FSTL3O95633 263 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 OTCP00480 354 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 ENO1P06733 434 aaKnown RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 OR4A8P0C604 315 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 PRPS2P11908 318 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 NTSP30990 170 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 APOBEC1P41238 236 aaKnown RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 SLC1A3P43003 542 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 PRR20EP86478 221 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 PRR20CP86479 221 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 PRR20DP86480 221 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 PRR20BP86481 221 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 PRR20AP86496 221 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 ZNF117Q03924 483 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 LCP2Q13094 533 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 TMPPEQ6ZT21 453 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 LCA5Q86VQ0 697 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 NATD1Q8N6N6 113 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 OR1K1Q8NGR3 316 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 FBXO27Q8NI29 283 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 PSMA8Q8TAA3 256 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 AMDHD1Q96NU7 426 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 GPR78Q96P69 363 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 ALG9Q9H6U8 611 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 PLEK2Q9NYT0 353 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 VPS29Q9UBQ0 182 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 NOSIPQ9Y314 301 aaKnown RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 PCNX3Q9H6A9 2034 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 GOLGA6L10A0A0M3HER8 536 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 H3BNH8 94 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 SYNGR3O43761 229 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 KCNK2O95069 426 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 AK1P00568 194 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 IGHV2-5P01817 119 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 IL3P08700 152 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 CBR1P16152 277 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 TSPAN8P19075 237 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 GPR6P46095 362 aaPredicted RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 HTR3AP46098 478 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 ZNF75DP51815 510 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 CCNG1P51959 295 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 MRPS35P82673 323 aaKnown RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 ZNF763Q0D2J5 394 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 DDX39BQ13838 428 aaKnown RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 PDE7AQ13946 482 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 ZNF141Q15928 474 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 FAM83EQ2M2I3 478 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 LIAT1Q6ZQX7 453 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 RINLQ6ZS11 566 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 RHOUQ7L0Q8 258 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 CENPLQ8N0S6 344 aaPredicted RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 ZFP28Q8NHY6 868 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 SFXN5Q8TD22 340 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 BCL2L2Q92843 193 aaPredicted RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 MOAP1Q96BY2 351 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 MTERF3Q96E29 417 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 CFAP36Q96G28 342 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 SERINC1Q9NRX5 453 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 DDX28Q9NUL7 540 aaKnown RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 NUP50Q9UKX7 468 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 ARFGEF3Q5TH69 2177 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 LRP5LA4QPB2 252 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 C17orf51A8MQB3 221 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 H3BSA7 217 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 SCAMP2O15127 329 aaKnown RBP3.94□□□□□ -1.78
SNCA-213ENST00000618500 PCDH7O60245 1069 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 RAD51DO75771 328 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 PDYNP01213 254 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 CRYAAP02489 173 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 ACP2P11117 423 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 IFNGR1P15260 489 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 MAGEA8P43361 318 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 ASMTP46597 345 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 PSMA6P60900 246 aaKnown RBP3.94□□□□□ -1.78
SNCA-213ENST00000618500 RPS23P62266 143 aaKnown RBP3.94□□□□□ -1.78
SNCA-213ENST00000618500 TRADDQ15628 312 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 TRIP13Q15645 432 aaPredicted RBP3.94□□□□□ -1.78
SNCA-213ENST00000618500 KLC3Q6P597 504 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 ANKRD16Q6P6B7 361 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 RIBC1Q8N443 379 aaPredicted RBP3.94□□□□□ -1.78
SNCA-213ENST00000618500 OR4F5Q8NH21 305 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 DCAKDQ8WVC6 231 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 TMEM234Q8WY98 164 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 SNX18Q96RF0 628 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms