RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 IL20RBQ6UXL0 311 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 ABI3BPQ7Z7G0 1075 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 JAGN1Q8N5M9 183 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 PMM1Q92871 262 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 NXPE2Q96DL1 559 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 MVB12AQ96EY5 273 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 SLC35A4Q96G79 324 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 TTYH2Q9BSA4 534 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 A0A1B0GVI7 797 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 M0R036 132 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 FLRT2O43155 660 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 GPR3P46089 330 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 HLA-BQ31612 363 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 CLEC1AQ8NC01 280 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 OR5B2Q96R09 309 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 LRRN3Q9H3W5 708 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 ENAMQ9NRM1 1142 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 ZNF337Q9Y3M9 751 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 PCDHGB6Q9Y5F9 930 aa12.89□□□□□ -0.35
CIITA-213ENST00000618327 TRBV2A0A0J9YWF9 115 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 GJE1A6NN92 205 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 UTS2O95399 124 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 CYB5AP00167 134 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 ICAM2P13598 275 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 MRPL19P49406 292 aaKnown RBP12.88□□□□□ -0.35
CIITA-213ENST00000618327 PER3P56645 1201 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 ERVK-25P63136 954 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 HSD17B12Q53GQ0 312 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 DGLUCYQ7Z3D6 616 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 TMPRSS9Q7Z410 1059 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 ZER1Q7Z7L7 766 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 B3GNT8Q7Z7M8 397 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 UEVLDQ8IX04 471 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 SDR9C7Q8NEX9 313 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 SDF2Q99470 211 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 EGLN3Q9H6Z9 239 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 PRDM7Q9NQW5 492 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 SACM1LQ9NTJ5 587 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 MYF5P13349 255 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 RAE1P78406 368 aaKnown RBP12.88□□□□□ -0.35
CIITA-213ENST00000618327 C22orf42Q6IC83 251 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 TMEM17Q86X19 198 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 RIMKLAQ8IXN7 391 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 OR4C15Q8NGM1 316 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 DUSP19Q8WTR2 217 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 ACOT12Q8WYK0 555 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 SLCO4A1Q96BD0 722 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 DUS3LQ96G46 650 aaKnown RBP12.88□□□□□ -0.35
CIITA-213ENST00000618327 WDR77Q9BQA1 342 aaPredicted RBP12.88□□□□□ -0.35
CIITA-213ENST00000618327 SERTM1A2A2V5 107 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 ASPDHA6ND91 283 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 KIAA0513O60268 411 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 ERP29P30040 261 aaKnown RBP12.88□□□□□ -0.35
CIITA-213ENST00000618327 SMN1Q16637 294 aaKnown RBP12.88□□□□□ -0.35
CIITA-213ENST00000618327 VWA2Q5GFL6 755 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 ZNF627Q7L945 461 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 CAMKMTQ7Z624 323 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 CEACAM19Q7Z692 300 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 KMT5CQ86Y97 462 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 PTOV1Q86YD1 416 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 ZNF283Q8N7M2 679 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 CREB3L1Q96BA8 519 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 ZMYND19Q96E35 227 aaPredicted RBP12.88□□□□□ -0.35
CIITA-213ENST00000618327 SFXN2Q96NB2 322 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 PRR14Q9BWN1 585 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 BEX2Q9BXY8 128 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 B3GNT4Q9C0J1 378 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 S1PR5Q9H228 398 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 BEX1Q9HBH7 125 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 EMC3Q9P0I2 261 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 IGHEP01854 428 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 STT3AP46977 705 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 BTG2P78543 158 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 MBOAT2Q6ZWT7 520 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
CIITA-213ENST00000618327 PNLDC1Q8NA58 520 aaKnown RBP12.88□□□□□ -0.35
CIITA-213ENST00000618327 NRSN2Q9GZP1 204 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 STUB1Q9UNE7 303 aa12.88□□□□□ -0.35
CIITA-213ENST00000618327 A0A1B0GWA3 101 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 FAM171A2A8MVW0 826 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 CHRNB1P11230 501 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 WNT4P56705 351 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 OR7A5Q15622 319 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 EEF1A1P5Q5VTE0 462 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 TMED4Q7Z7H5 227 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 RBM45Q8IUH3 476 aaKnown RBP12.87□□□□□ -0.35
CIITA-213ENST00000618327 TMEM163Q8TC26 289 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 ZNF700Q9H0M5 742 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 CHRDQ9H2X0 955 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 POLE4Q9NR33 117 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 MIA3Q5JRA6 1907 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 TCRBV5S2A0A599 114 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 ACOT7O00154 380 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 UPK1AO00322 258 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 LGI1O95970 557 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 RAB40BQ12829 278 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 TMEM71Q6P5X7 295 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 CCBE1Q6UXH8 406 aaPredicted RBP12.87□□□□□ -0.35
CIITA-213ENST00000618327 ZNF836Q6ZNA1 936 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 OR8K3Q8NH51 312 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms