RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 RORCP51449 518 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 PRKCDQ05655 676 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 ZP2Q05996 745 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 GRM7Q14831 915 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 SLC25A45Q8N413 288 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 C10orf53Q8N6V4 93 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 ERMAPQ96PL5 475 aaPredicted RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 ARHGAP9Q9BRR9 750 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 LMF2Q9BU23 707 aaKnown RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 NXF5Q9H1B4 397 aaKnown RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 ATXN7L1Q9ULK2 861 aaPredicted RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 EXOSC1Q9Y3B2 195 aaKnown RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 PCDHGB6Q9Y5F9 930 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 FAM86C2PA6NEL3 165 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 TNFRSF10AO00220 468 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 SLC30A4O14863 429 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 BCAT2O15382 392 aaPredicted RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 CHP2O43745 196 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 RCBTB2O95199 551 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 TGM1P22735 817 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 HTR1FP30939 366 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 RPL4P36578 427 aaKnown RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 ATP12AP54707 1039 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 DAB2P98082 770 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 DSG2Q14126 1118 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 CD226Q15762 336 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 PRPF38BQ5VTL8 546 aaKnown RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 UTS2BQ765I0 119 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 KLHL36Q8N4N3 616 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 OR52E2Q8NGJ4 325 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 ADOQ96SZ5 270 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 DPYSL5Q9BPU6 564 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 MESP1Q9BRJ9 268 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 NUDT22Q9BRQ3 303 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 CCDC86Q9H6F5 360 aaKnown RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 TIGARQ9NQ88 270 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 MALT1Q9UDY8 824 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 MED12Q93074 2177 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 EML5Q05BV3 1969 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 IGHV1OR21-1A0A087WYE8 117 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 TMEM129A0AVI4 362 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 CASKO14936 926 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 OIP5O43482 229 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 SSX4O60224 188 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 COPZ1P61923 177 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.41□□□□□ -0.58
CIITA-212ENST00000618207 NIPAL3Q6P499 406 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 PRR23CQ6ZRP0 262 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 FAM98AQ8NCA5 519 aaKnown RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 OR1L3Q8NH93 324 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 SLC30A2Q9BRI3 323 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 NXF2Q9GZY0 626 aaKnown RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 ABCB9Q9NP78 766 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 KLHL1Q9NR64 748 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 COMMD3Q9UBI1 195 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 DAPL1A0PJW8 107 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 FAM171A2A8MVW0 826 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 SPNP16150 400 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 POU3F3P20264 500 aaPredicted RBP11.4□□□□□ -0.58
CIITA-212ENST00000618207 CSF2RBP32927 897 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 EFNA3P52797 238 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 PLK5Q496M5 336 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 TCTE1Q5JU00 501 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 GARNL3Q5VVW2 1013 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 NIPAL1Q6NVV3 410 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 ZNF613Q6PF04 617 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 RPTNQ6XPR3 784 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 MARCH9Q86YJ5 346 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 GPR135Q8IZ08 494 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 RNF113BQ8IZP6 322 aaKnown RBP11.4□□□□□ -0.58
CIITA-212ENST00000618207 UBE2J2Q8N2K1 259 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 TOR1AIP2Q8NFQ8 470 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 OR5M3Q8NGP4 307 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 BRIX1Q8TDN6 353 aaKnown RBP11.4□□□□□ -0.58
CIITA-212ENST00000618207 PTPMT1Q8WUK0 201 aaPredicted RBP11.4□□□□□ -0.58
CIITA-212ENST00000618207 KCTD7Q96MP8 289 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 ALG8Q9BVK2 526 aa11.4□□□□□ -0.58
CIITA-212ENST00000618207 TMA7Q9Y2S6 64 aaKnown RBP11.4□□□□□ -0.58
CIITA-212ENST00000618207 IGHV3-20A0A0C4DH32 117 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 CPED1A4D0V7 1026 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 SERINC4A6NH21 518 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 RIIAD1A6NNX1 92 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 C4orf47A7E2U8 309 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 BLOC1S5-TXNDC5H3BN57 136 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 KHNYNO15037 678 aaKnown RBP11.4□□□□□ -0.59
CIITA-212ENST00000618207 ZNF749O43361 778 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 NAA10P41227 235 aaPredicted RBP11.4□□□□□ -0.59
CIITA-212ENST00000618207 HSD17B7P56937 341 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 FGFBP1Q14512 234 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 NSDHLQ15738 373 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 TAB1Q15750 504 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 WDR45BQ5MNZ6 344 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 APOOLQ6UXV4 268 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 SPATC1Q76KD6 591 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 MEPCEQ7L2J0 689 aaKnown RBP11.4□□□□□ -0.59
CIITA-212ENST00000618207 CADM3Q8N126 398 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 LNX2Q8N448 690 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 ACBD7Q8N6N7 88 aa11.4□□□□□ -0.59
CIITA-212ENST00000618207 ZNF615Q8N8J6 731 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms