RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 OR2T1O43869 369 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 IL33O95760 270 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 UBL4AP11441 157 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 FOSL1P15407 271 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 GPX2P18283 190 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 CLDN6P56747 220 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 INAVAQ3KP66 663 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 OR1S1Q8NH92 325 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 ABHD4Q8TB40 342 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 CDS1Q92903 461 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 ZIC5Q96T25 663 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 NIPSNAP1Q9BPW8 284 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 ARPC5LQ9BPX5 153 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 NAA11Q9BSU3 229 aaPredicted RBP9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 DEFB126Q9BYW3 111 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 DNTTIP1Q9H147 329 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 PLEKHA3Q9HB20 300 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 NRIP3Q9NQ35 241 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 FAM212BQ9NTI7 297 aaPredicted RBP9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 GPATCH2Q9NW75 528 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 TRABD2BA6NFA1 517 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 A8MVJ9 347 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 NFKBIEO00221 500 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 LATO43561 262 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 SLC6A8P48029 635 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 MRPL49Q13405 166 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 SLX4IPQ5VYV7 408 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 NIPAL3Q6P499 406 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 VRK2Q86Y07 508 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 SLC2A12Q8TD20 617 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 ZNF480Q8WV37 535 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 PEX11GQ96HA9 241 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 SLC19A3Q9BZV2 496 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 AMBRA1Q9C0C7 1298 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 ACKR4Q9NPB9 350 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 SEMA4GQ9NTN9 838 aa9.98□□□□□ -0.81
CLTCL1-209ENST00000617103 PRICKLE3O43900 615 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 BRINP1O60477 761 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 EDN1P05305 212 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 RHOP08100 348 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 CCR9P51686 369 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 SNU13P55769 128 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 SIRPAP78324 504 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 MALLQ13021 153 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 GPM6BQ13491 265 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 DCST2Q5T1A1 773 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 NXNL2Q5VZ03 156 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 B3GLCTQ6Y288 498 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 TMEM200AQ86VY9 491 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 RNF113BQ8IZP6 322 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 RNF175Q8N4F7 328 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 DYNC2LI1Q8TCX1 351 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 SLC38A5Q8WUX1 472 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 HAS2Q92819 552 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 RADILQ96JH8 1075 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 OR7D2Q96RA2 312 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 ZFYVE21Q9BQ24 234 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 SLC25A31Q9H0C2 315 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 DUSP21Q9H596 190 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 CIB4A0PJX0 185 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 A8MXE2 369 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 H0YIV9 168 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 K7EPK0 472 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 SMAD6O43541 496 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 ONECUT3O60422 494 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 OPRD1P41143 372 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 UBE2KP61086 200 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 MEX3BQ6ZN04 569 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 FAM71E2Q8N5Q1 922 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 UBE2FQ969M7 185 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 SLC39A13Q96H72 371 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 SEC22AQ96IW7 307 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 LMF2Q9BU23 707 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 HCAR1Q9BXC0 346 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 ALOXE3Q9BYJ1 711 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 CSNK1G1Q9HCP0 422 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 SMCO4Q9NRQ5 59 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 ZNF337Q9Y3M9 751 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 SLC22A7Q9Y694 548 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 MYH1P12882 1939 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 MYH4Q9Y623 1939 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 PARP4Q9UKK3 1724 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 AKAP12Q02952 1782 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 A0A0B4J2A0 478 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 A0A1B0GTW7 788 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 ACOD1A6NK06 481 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 FOXE1O00358 373 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 RNGTTO60942 597 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 OR2T7P0C7T2 308 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 OR1Q1Q15612 314 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 GPR155Q7Z3F1 870 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 IFNL1Q8IU54 200 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 OR52I1Q8NGK6 324 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 OR2T27Q8NH04 317 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 MARC2Q969Z3 335 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 TRMT2BQ96GJ1 504 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 MYADMQ96S97 322 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 KCNIP1Q9NZI2 227 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 KLHL13Q9P2N7 655 aa9.97□□□□□ -0.81
CLTCL1-209ENST00000617103 SHPKQ9UHJ6 478 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms