RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 MSX2P35548 267 aaPredicted RBP8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 EVX1P49640 407 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 RAC3P60763 192 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 CDKL1Q00532 357 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 FOXF1Q12946 379 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 TMEM176BQ3YBM2 270 aaPredicted RBP8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 CYP27C1Q4G0S4 372 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 ANKRD16Q6P6B7 361 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 BRD3OSQ6XYD6 125 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 RNF175Q8N4F7 328 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 RNF214Q8ND24 703 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 SSMEM1Q8WWF3 244 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 ARL5BQ96KC2 179 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 MRPL37Q9BZE1 423 aaKnown RBP8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 ZNF385DQ9H6B1 395 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 ANKRA2Q9H9E1 313 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 OBP2BQ9NPH6 170 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 GRID1Q9ULK0 1009 aa8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 PLECQ15149 4684 aaKnown RBP8.62□□□□□ -1.03
AP003900.1-202ENST00000616952 IGKV3D-15A0A087WSY6 115 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 SDR42E2A6NKP2 422 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 TRIM49D1C9J1S8 452 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 CLDN25C9JDP6 229 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 AKR1B15C9JRZ8 316 aaPredicted RBP8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 TRAPPC2LH3BP13 241 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 JTBO76095 146 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 SLC7A1P30825 629 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 ADMP35318 185 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 BSGP35613 385 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 GP5P40197 560 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 VPS41P49754 854 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 ARFIP1P53367 373 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 SEC24CP53992 1094 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 GPX6P59796 221 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 PRR5P85299 388 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 SNTB2Q13425 540 aaKnown RBP8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 DDX39BQ13838 428 aaKnown RBP8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 MAD2L1BPQ15013 274 aaPredicted RBP8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 ABLIM2Q6H8Q1 611 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 APOOLQ6UXV4 268 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 LAS2Q8IYD9 372 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 ZNF527Q8NB42 609 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 SLC35B2Q8TB61 432 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 ACTRT2Q8TDY3 377 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 CFHR4Q92496 578 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 UBE2E3Q969T4 207 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 SERPINB12Q96P63 405 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 DNAJC7Q99615 494 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 MMP28Q9H239 520 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 DDX31Q9H8H2 851 aaKnown RBP8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 LIN7BQ9HAP6 207 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 NPHS2Q9NP85 383 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 CRNNQ9UBG3 495 aaPredicted RBP8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 CMAHPQ9Y471 501 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 ARHGAP32A7KAX9 2087 aa8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 HUWE1Q7Z6Z7 4374 aaKnown RBP8.61□□□□□ -1.03
AP003900.1-202ENST00000616952 ZNF816-ZNF321PA0A0X1KG74 233 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 NPEPPSL1A6NEC2 478 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 AGAP5A6NIR3 686 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 KIF2AO00139 706 aaPredicted RBP8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 AP3B1O00203 1094 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 EFNA2O43921 213 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 MGRN1O60291 552 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 ERAL1O75616 437 aaKnown RBP8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 ZFPL1O95159 310 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 IFNB1P01574 187 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 IGLV1-44P01699 117 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 GBAP04062 536 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 PPIAL4GP0DN37 164 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 NTF4P34130 210 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 EIF1P41567 113 aaKnown RBP8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 PGGT1BP53609 377 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 IRF8Q02556 426 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 BST1Q10588 318 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 DHX34Q14147 1143 aaKnown RBP8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 TRIP13Q15645 432 aaPredicted RBP8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 PDK4Q16654 411 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 C3orf36Q3SXR2 165 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 RBM20Q5T481 1227 aaKnown RBP8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 AADACL2Q6P093 401 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 MED27Q6P2C8 311 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 NUDT13Q86X67 352 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 C1orf174Q8IYL3 243 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 OR7G3Q8NG95 312 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 OR10S1Q8NGN2 331 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 UPRTQ96BW1 309 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 TIMD4Q96H15 378 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 FAM71F1Q96KD3 344 aaPredicted RBP8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 SIGLEC10Q96LC7 697 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 GBP4Q96PP9 640 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 KLHDC3Q9BQ90 382 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 UBAP1Q9NZ09 502 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 FBXO5Q9UKT4 447 aa8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 POLR3KQ9Y2Y1 108 aaPredicted RBP8.6□□□□□ -1.03
AP003900.1-202ENST00000616952 MRPL33O75394 65 aaKnown RBP8.59□□□□□ -1.03
AP003900.1-202ENST00000616952 BCAS2O75934 225 aaPredicted RBP8.59□□□□□ -1.03
AP003900.1-202ENST00000616952 LINGO3P0C6S8 592 aa8.59□□□□□ -1.03
AP003900.1-202ENST00000616952 CSNK2A2P19784 350 aaPredicted RBP8.59□□□□□ -1.03
AP003900.1-202ENST00000616952 CTNNA1P35221 906 aaKnown RBP8.59□□□□□ -1.03
AP003900.1-202ENST00000616952 MAGEB1P43366 347 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms