RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	CD207	Q9UJ71	328 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	ZNF221	Q9UK13	617 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CLEC4A	Q9UMR7	237 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	RPH3A	Q9Y2J0	694 aa	Predicted RBP	12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	MEIOC	A2RUB1	952 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	LRRN3	E7EW58	273 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	PRR23D1	E9PI22	279 aa	Predicted RBP	12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390		E9PI62	339 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390		J3QLW9	94 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	POLR1C	O15160	346 aa	Predicted RBP	12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	PRR23D2	P0DMB1	279 aa	Predicted RBP	12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	SLC2A2	P11168	524 aa	Predicted RBP	12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	ZNF19	P17023	458 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	BMP8B	P34820	402 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	PGD	P52209	483 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CTBP2	P56545	445 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	FOXK2	Q01167	660 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	GPR50	Q13585	617 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	GXYLT1	Q4G148	440 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	MEPCE	Q7L2J0	689 aa	Known RBP	12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	BMP8A	Q7Z5Y6	402 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	KCTD20	Q7Z5Y7	419 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390		Q8N402	240 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	ACBD7	Q8N6N7	88 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	AVL9	Q8NBF6	648 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	RLN3	Q8WXF3	142 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	PTP4A1	Q93096	173 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	DACT3	Q96B18	629 aa	Predicted RBP	12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	PEX11G	Q96HA9	241 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	TNFRSF13C	Q96RJ3	184 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	S1PR5	Q9H228	398 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	LRRN3	Q9H3W5	708 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	ENAM	Q9NRM1	1142 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	MED31	Q9Y3C7	131 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	PCDHGB2	Q9Y5G2	931 aa		12.84	□□□□□ -0.35
CACNA1C-231	ENST00000616390	TRDV1	A0A1B0GX56	115 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390		A6NL46	340 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	CHST10	O43529	356 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	GALR3	O60755	368 aa	Predicted RBP	12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ATAD3C	Q5T2N8	411 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	VASN	Q6EMK4	673 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ZNF544	Q6NX49	715 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	NIPAL3	Q6P499	406 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ARL14	Q8N4G2	192 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	FAM160A2	Q8N612	972 aa	Predicted RBP	12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ZNF655	Q8N720	491 aa	Predicted RBP	12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	C19orf18	Q8NEA5	215 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	RNF31	Q96EP0	1072 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	WAC	Q9BTA9	647 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	TMEM27	Q9HBJ8	222 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	KLHL1	Q9NR64	748 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	NTM	Q9P121	344 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	SCML1	Q9UN30	329 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	POLH	Q9Y253	713 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	BOLA1	Q9Y3E2	137 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	MN1	Q10571	1320 aa	Predicted RBP	12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390		A0A0J9YY10	115 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ATP1B1	P05026	303 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	THBS1	P07996	1170 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	PSKH1	P11801	424 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ICAM2	P13598	275 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	HHEX	Q03014	270 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	TBRG1	Q3YBR2	411 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	TRIQK	Q629K1	86 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ARMC6	Q6NXE6	501 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	TMEM91	Q6ZNR0	172 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	OAF	Q86UD1	273 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	OOSP2	Q86WS3	158 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	VWA5B2	Q8N398	1253 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ENKUR	Q8TC29	256 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	SENP5	Q96HI0	755 aa	Predicted RBP	12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ARL5B	Q96KC2	179 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ATF6B	Q99941	703 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	LMAN2L	Q9H0V9	348 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	TP63	Q9H3D4	680 aa	Predicted RBP	12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	NUFIP1	Q9UHK0	495 aa	Known RBP	12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ZNF223	Q9UK11	482 aa	Predicted RBP	12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	EXOG	Q9Y2C4	368 aa	Known RBP	12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	DTX4	Q9Y2E6	619 aa		12.83	□□□□□ -0.36
CACNA1C-231	ENST00000616390	FAM86C2P	A6NEL3	165 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	BHLHE40	O14503	412 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	RNF13	O43567	381 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	SHC1	P29353	583 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	PLAUR	Q03405	335 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	CRYZ	Q08257	329 aa	Known RBP	12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	STX4	Q12846	297 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	FZD5	Q13467	585 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	HTR4	Q13639	388 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	CRMP1	Q14194	572 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	AMZ1	Q400G9	498 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ARIH2OS	Q8N7S6	290 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	OR6C4	Q8NGE1	309 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	OR4C6	Q8NH72	309 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	TTYH2	Q9BSA4	534 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	GPR174	Q9BXC1	333 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	SLC22A4	Q9H015	551 aa		12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	PPIL3	Q9H2H8	161 aa	Known RBP	12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	CCDC86	Q9H6F5	360 aa	Known RBP	12.82	□□□□□ -0.36
CACNA1C-231	ENST00000616390	LYRM4	Q9HD34	91 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms