RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, human

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-223	ENST00000616010	HS6ST2	Q96MM7	605 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010	SIGLEC12	Q96PQ1	595 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010	GPA33	Q99795	319 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010	HHATL	Q9HCP6	504 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010		A0A0G2JMM0	328 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010		A0A1W2PPB8	328 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010		A0A1W2PRS3	328 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010	KIR3DP1	A8MWS1	328 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010	NEURL1	O76050	574 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010	PNMT	P11086	282 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010	CAPG	P40121	348 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010	ALDH6A1	Q02252	535 aa	Known RBP	21.31	■■□□□ 1
CCND3-223	ENST00000616010	SLC36A3	Q495N2	470 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010	TTC33	Q6PID6	262 aa	Predicted RBP	21.31	■■□□□ 1
CCND3-223	ENST00000616010	RNF113B	Q8IZP6	322 aa	Known RBP	21.31	■■□□□ 1
CCND3-223	ENST00000616010	JSRP1	Q96MG2	331 aa	Predicted RBP	21.31	■■□□□ 1
CCND3-223	ENST00000616010	UCK2	Q9BZX2	261 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010	ADAM19	Q9H013	955 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010	CCDC86	Q9H6F5	360 aa	Known RBP	21.31	■■□□□ 1
CCND3-223	ENST00000616010	ZNF552	Q9H707	407 aa	Predicted RBP	21.31	■■□□□ 1
CCND3-223	ENST00000616010	C20orf141	Q9NUB4	165 aa		21.31	■■□□□ 1
CCND3-223	ENST00000616010	SNPH	O15079	494 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	WISP1	O95388	367 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	DNASE1L1	P49184	302 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	ZNF41	P51814	821 aa	Predicted RBP	21.3	■■□□□ 1
CCND3-223	ENST00000616010	OR1C1	Q15619	314 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	PLCZ1	Q86YW0	608 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	FADS6	Q8N9I5	356 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	TMEM234	Q8WY98	164 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	NTNG2	Q96CW9	530 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	GABARAPL3	Q9BY60	117 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	TIMMDC1	Q9NPL8	285 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	MEPE	Q9NQ76	525 aa	Predicted RBP	21.3	■■□□□ 1
CCND3-223	ENST00000616010	FAM118A	Q9NWS6	357 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	OSGIN1	Q9UJX0	560 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	LRCH1	Q9Y2L9	728 aa		21.3	■■□□□ 1
CCND3-223	ENST00000616010	SLC25A12	O75746	678 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	SNX4	O95219	450 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	CLIC3	O95833	236 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	ADRB1	P08588	477 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	GNAO1	P09471	354 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	IFI30	P13284	250 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	PRKCA	P17252	672 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	EPHA2	P29317	976 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	ADARB1	P78563	741 aa	Known RBP	21.29	■■□□□ 1
CCND3-223	ENST00000616010	GRINA	Q7Z429	371 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	PARP8	Q8N3A8	854 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	ZNF555	Q8NEP9	628 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	FDCSP	Q8NFU4	85 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	ST8SIA1	Q92185	356 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	CNBD2	Q96M20	576 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	MED17	Q9NVC6	651 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	SOX14	O95416	240 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	GPR85	P60893	370 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	NPRL3	Q12980	569 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	MFAP5	Q13361	173 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	SPACA3	Q8IXA5	215 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	GNPDA2	Q8TDQ7	276 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	TMEM41A	Q96HV5	264 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	PTGES2	Q9H7Z7	377 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	C12orf10	Q9HB07	376 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	DKK4	Q9UBT3	224 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	KCNMB2	Q9Y691	235 aa		21.29	■■□□□ 1
CCND3-223	ENST00000616010	ACACA	Q13085	2346 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	MPDZ	O75970	2070 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010		H0YAE9	185 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	CCNA2	P20248	432 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	POLR2H	P52434	150 aa	Known RBP	21.28	■■□□□ 1
CCND3-223	ENST00000616010	PRKCD	Q05655	676 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	CRYZ	Q08257	329 aa	Known RBP	21.28	■■□□□ 1
CCND3-223	ENST00000616010	MED21	Q13503	144 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	OR1J4	Q8NGS1	313 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	NPAS1	Q99742	590 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	ANKRD60	Q9BZ19	345 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	GRIP2	Q9C0E4	1043 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	DEPP	Q9NTK1	212 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	LAMA5	O15230	3695 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	IGKV1D-42	A0A075B6H8	117 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	OR5H15	A6NDH6	313 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	DENR	O43583	198 aa	Known RBP	21.28	■■□□□ 1
CCND3-223	ENST00000616010	TCEA1	P23193	301 aa	Known RBP	21.28	■■□□□ 1
CCND3-223	ENST00000616010	CXCR1	P25024	350 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	FPR3	P25089	353 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	GSS	P48637	474 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	FOXF1	Q12946	379 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	TSPAN31	Q12999	210 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	PLPPR5	Q32ZL2	321 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	CCDC81	Q6ZN84	652 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	CHERP	Q8IWX8	916 aa	Known RBP	21.28	■■□□□ 1
CCND3-223	ENST00000616010	BPIFA2	Q96DR5	249 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	C1GALT1C1	Q96EU7	318 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	DCBLD2	Q96PD2	775 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	REV1	Q9UBZ9	1251 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	ENOPH1	Q9UHY7	261 aa		21.28	■■□□□ 1
CCND3-223	ENST00000616010	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		21.27	■■□□□ 1
CCND3-223	ENST00000616010	LOC100130705	A0A1B0GUX0	176 aa		21.27	■■□□□ 1
CCND3-223	ENST00000616010	ENO4	A6NNW6	628 aa		21.27	■■□□□ 1
CCND3-223	ENST00000616010	CDC42EP2	O14613	210 aa		21.27	■■□□□ 1
CCND3-223	ENST00000616010	KLF4	O43474	513 aa		21.27	■■□□□ 1
CCND3-223	ENST00000616010	TRIM3	O75382	744 aa	Predicted RBP	21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms