RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 LYPD3O95274 346 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 THY1P04216 161 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 LINGO3P0C6S8 592 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 CCL3P10147 92 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 PGCP20142 388 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 CYB561P49447 251 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 ALDH3A2P51648 485 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 DLX5P56178 289 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 COPZ1P61923 177 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 MFAP5Q13361 173 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 CBFBQ13951 182 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 LRRC36Q1X8D7 754 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 MICAQ29983 383 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 FGD3Q5JSP0 725 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 DCST1Q5T197 706 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 ZNF468Q5VIY5 522 aaPredicted RBP10.4□□□□□ -0.74
SLIRP-212ENST00000613856 AGAP7PQ5VUJ5 663 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 SLC22A10Q63ZE4 541 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 WBP2NLQ6ICG8 309 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 FAHD1Q6P587 224 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 ISLR2Q6UXK2 745 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 GDF7Q7Z4P5 450 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 STK32CQ86UX6 486 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 OR10G2Q8NGC3 310 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 GIPC3Q8TF64 312 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 DNAJA4Q8WW22 397 aaPredicted RBP10.4□□□□□ -0.74
SLIRP-212ENST00000613856 MPP4Q96JB8 637 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 RDH12Q96NR8 316 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 AGAP4Q96P64 663 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 ALPK1Q96QP1 1244 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 RBM4BQ9BQ04 359 aaKnown RBP10.4□□□□□ -0.74
SLIRP-212ENST00000613856 RBM4Q9BWF3 364 aaKnown RBP10.4□□□□□ -0.74
SLIRP-212ENST00000613856 PRR14Q9BWN1 585 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 C12orf10Q9HB07 376 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 GPR83Q9NYM4 423 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 STMN3Q9NZ72 180 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 PDP1Q9P0J1 537 aaPredicted RBP10.4□□□□□ -0.74
SLIRP-212ENST00000613856 PPP4R1LQ9P1A2 415 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 RHCGQ9UBD6 479 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 TMCC3Q9ULS5 477 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 NTNG1Q9Y2I2 539 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 APCP25054 2843 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 POLQO75417 2590 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 SH3PXD2BA1X283 911 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 ETV2O00321 342 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-212ENST00000613856 SNPHO15079 494 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 CEACAM4O75871 244 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 CCNB2O95067 398 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 SNX4O95219 450 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 ALPLP05186 524 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 RBM34P42696 430 aaKnown RBP10.39□□□□□ -0.75
SLIRP-212ENST00000613856 HSPA13P48723 471 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 CCL11P51671 97 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 CCR4P51679 360 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 RIPPLY3P57055 190 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 PPP1R8Q12972 351 aaKnown RBP10.39□□□□□ -0.75
SLIRP-212ENST00000613856 TUBA3CQ13748 450 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 BICRALQ6AI39 1079 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 ZNF770Q6IQ21 691 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-212ENST00000613856 TUBA3EQ6PEY2 450 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 PODNL1Q6PEZ8 512 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 ULK3Q6PHR2 472 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 TBPL2Q6SJ96 375 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 IZUMO2Q6UXV1 221 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 PACS2Q86VP3 889 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 ZNF227Q86WZ6 799 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 HS3ST5Q8IZT8 346 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 FADS6Q8N9I5 356 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 PSD4Q8NDX1 1056 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 OR52J3Q8NH60 311 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 SLC7A13Q8TCU3 470 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 DUSP19Q8WTR2 217 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 ACOT11Q8WXI4 607 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-212ENST00000613856 DNAJC9Q8WXX5 260 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 SLC38A4Q969I6 547 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 C3orf49Q96BT1 292 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 SH3YL1Q96HL8 342 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-212ENST00000613856 TMEM41AQ96HV5 264 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 ZNF597Q96LX8 424 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 ZNF184Q99676 751 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-212ENST00000613856 BARD1Q99728 777 aaKnown RBP10.39□□□□□ -0.75
SLIRP-212ENST00000613856 SLC29A1Q99808 456 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 PRSS27Q9BQR3 290 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 UTP23Q9BRU9 249 aaKnown RBP10.39□□□□□ -0.75
SLIRP-212ENST00000613856 ZNF426Q9BUY5 554 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 GALNT9Q9HCQ5 603 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 CTPS2Q9NRF8 586 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 SACM1LQ9NTJ5 587 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 RPS6KB2Q9UBS0 482 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 SLC7A7Q9UM01 511 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 PCDHGB6Q9Y5F9 930 aa10.39□□□□□ -0.75
SLIRP-212ENST00000613856 MAGED1Q9Y5V3 778 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-212ENST00000613856 DIDO1Q9BTC0 2240 aaKnown RBP10.39□□□□□ -0.75
SLIRP-212ENST00000613856 B4DXG7 233 aa10.38□□□□□ -0.75
SLIRP-212ENST00000613856 CDC40O60508 579 aaKnown RBP eCLIP10.38□□□□□ -0.75
SLIRP-212ENST00000613856 NEURL1O76050 574 aa10.38□□□□□ -0.75
SLIRP-212ENST00000613856 ADAP00813 363 aa10.38□□□□□ -0.75
SLIRP-212ENST00000613856 P04436 131 aa10.38□□□□□ -0.75
SLIRP-212ENST00000613856 ANXA8P13928 327 aa10.38□□□□□ -0.75
SLIRP-212ENST00000613856 FUT4P22083 530 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms