RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 OR9K2Q8NGE7 335 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ZBED6CLQ96FA7 236 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SLC35A5Q9BS91 424 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 AP5M1Q9H0R1 490 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 RDH14Q9HBH5 336 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 AGO4Q9HCK5 861 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 RASL12Q9NYN1 266 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 LATO43561 262 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 AMY2BP19961 511 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 LHX1P48742 406 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 DIO3P55073 304 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 UEVLDQ8IX04 471 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 C2orf69Q8N8R5 385 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 NUDT10Q8NFP7 164 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 XAGE5Q8WWM1 108 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 PNPLA2Q96AD5 504 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 PEBP4Q96S96 227 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ORAI2Q96SN7 254 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 RSRP1Q9BUV0 290 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 EXOSC3Q9NQT5 275 aaKnown RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 MRPL15Q9P015 296 aaKnown RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 KCNK7Q9Y2U2 307 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF541Q9H0D2 1346 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 TNRC6CQ9HCJ0 1690 aaKnown RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 C5orf52A6NGY3 159 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 M0R3H8 397 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 AIFM1O95831 613 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 BMP8BP34820 402 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 FRKP42685 505 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 PJVKQ0ZLH3 352 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 CELF3Q5SZQ8 465 aaKnown RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 MAVSQ7Z434 540 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 BMP8AQ7Z5Y6 402 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 OR56B2PQ8NGI1 322 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 KCNA7Q96RP8 456 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF341Q9BYN7 854 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 TMED3Q9Y3Q3 217 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ETV7Q9Y603 341 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 PATJQ8NI35 1801 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 CPSF4LA6NMK7 179 aaKnown RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 SPATA31C2B4DYI2 1134 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 RNGTTO60942 597 aaKnown RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 HLA-AP01891 365 aaKnown RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 HSD3B1P14060 373 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 PGCP20142 388 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 BPIFB3P59826 476 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 AARDQ4LEZ3 155 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF678Q5SXM1 525 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 OR5L1Q8NGL2 311 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 LKAAEAR1Q8TD35 194 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 NUDT11Q96G61 164 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 TKTL2Q9H0I9 626 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 CCNL1Q9UK58 526 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 URGCP-MRPS24S4R325 110 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 QSER1Q2KHR3 1735 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 TGIF2-C20orf24A0A0A6YYL0 155 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 UNC119BA6NIH7 251 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ELOA3DA6NLF2 546 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ZBTB7AO95365 584 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 NTSR2O95665 410 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ACAA1P09110 424 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ELFN1P0C7U0 828 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ENPP2Q13822 863 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.65□□□□□ -1.662e-6■■□□□ 11.7
VPS13D-213ENST00000613099 BAP18Q8IXM2 172 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ADAMTS18Q8TE60 1221 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 FN3KRPQ9HA64 309 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 MYOZ2Q9NPC6 264 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 TNFSF13BQ9Y275 285 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 SEPT4O43236 478 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 SCGB1D2O95969 90 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 PTHP01270 115 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 STK19P49842 368 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 GBX1Q14549 363 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 DOK7Q18PE1 504 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 C2orf76Q3KRA6 126 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 NKAIN2Q5VXU1 208 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 NPAS4Q8IUM7 802 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF619Q8N2I2 560 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 UBQLN4Q9NRR5 601 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 LSM7Q9UK45 103 aaKnown RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 CXorf65A6NEN9 183 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 DTYMKP23919 212 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 GDNFP39905 211 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 PTGER3P43115 390 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 CDX1P47902 265 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-213ENST00000613099 OR12D2P58182 307 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 RAB35Q15286 201 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 FIGNL1Q6PIW4 674 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 SLC35G3Q8N808 338 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 ZIC5Q96T25 663 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 UQCC1Q9NVA1 299 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 EPHA6Q9UF33 1036 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 MUTYHQ9UIF7 546 aa4.65□□□□□ -1.66
VPS13D-213ENST00000613099 SHANK3Q9BYB0 1731 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 LINC00614P0C842 121 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 TAS2R20P59543 309 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 ARMC12Q5T9G4 340 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 SCN4BQ8IWT1 228 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 GLIS1Q8NBF1 620 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms