RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 TSLPQ969D9 159 aa10.09□□□□□ -0.79
FAM3A-221ENST00000612856 ECHDC3Q96DC8 303 aa10.09□□□□□ -0.79
FAM3A-221ENST00000612856 C12orf10Q9HB07 376 aa10.09□□□□□ -0.79
FAM3A-221ENST00000612856 SCPEP1Q9HB40 452 aa10.09□□□□□ -0.79
FAM3A-221ENST00000612856 CALML5Q9NZT1 146 aa10.09□□□□□ -0.79
FAM3A-221ENST00000612856 EXTL2Q9UBQ6 330 aa10.09□□□□□ -0.79
FAM3A-221ENST00000612856 PSORS1C1Q9UIG5 152 aa10.09□□□□□ -0.79
FAM3A-221ENST00000612856 ICKQ9UPZ9 632 aa10.09□□□□□ -0.79
FAM3A-221ENST00000612856 NLRC5Q86WI3 1866 aa10.09□□□□□ -0.79
FAM3A-221ENST00000612856 SZT2Q5T011 3432 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 SCAMP2O15127 329 aaKnown RBP10.08□□□□□ -0.8
FAM3A-221ENST00000612856 SMAD9O15198 467 aaKnown RBP10.08□□□□□ -0.8
FAM3A-221ENST00000612856 PIAS2O75928 621 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 CSF3P09919 207 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ITGAMP11215 1152 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ICAM2P13598 275 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 CTBP2P56545 445 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 CRYZQ08257 329 aaKnown RBP10.08□□□□□ -0.8
FAM3A-221ENST00000612856 VMACQ2NL98 169 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ALG1LQ6GMV1 187 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 LINC00471Q8N535 108 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF527Q8NB42 609 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 SYT14Q8NB59 555 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 OR5P2Q8WZ92 322 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 RBPMSQ93062 196 aaKnown RBP10.08□□□□□ -0.8
FAM3A-221ENST00000612856 RADILQ96JH8 1075 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 SAP130Q9H0E3 1048 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 PTGES2Q9H7Z7 377 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 SDHAF3Q9NRP4 125 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 SH2B3Q9UQQ2 575 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 HS3ST3A1Q9Y663 406 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 L7N2F9 121 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 GAPDHSO14556 408 aaPredicted RBP10.08□□□□□ -0.8
FAM3A-221ENST00000612856 GP1BBP13224 206 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 C4BPBP20851 252 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF41P51814 821 aaPredicted RBP10.08□□□□□ -0.8
FAM3A-221ENST00000612856 GBX1Q14549 363 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 EXOC3L2Q2M3D2 409 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 SPATS1Q496A3 300 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ZBTB37Q5TC79 503 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 TMEM184AQ6ZMB5 413 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 FRRS1Q6ZNA5 592 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 C16orf47Q6ZP98 133 aaPredicted RBP10.08□□□□□ -0.8
FAM3A-221ENST00000612856 CCDC190Q86UF4 302 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 MARCH9Q86YJ5 346 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 MEIOBQ8N635 442 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 DTWD2Q8NBA8 298 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 CYB561A3Q8NBI2 242 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 GATAD2BQ8WXI9 593 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ENAMQ9NRM1 1142 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 LYARQ9NX58 379 aaKnown RBP10.08□□□□□ -0.8
FAM3A-221ENST00000612856 TNFRSF10DQ9UBN6 386 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 PTPRDP23468 1912 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 SH3D21A4FU49 640 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 TRIM64BA6NI03 449 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF726A6NNF4 738 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ETHE1O95571 254 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 NPPAP01160 153 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ATP5A1P25705 553 aaKnown RBP10.08□□□□□ -0.8
FAM3A-221ENST00000612856 KIAA1024LP59773 190 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ERVK-25P63136 954 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 SWI5Q1ZZU3 235 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 LEXMQ3ZCV2 418 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 NKAIN1Q4KMZ8 207 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 MZT2AQ6P582 158 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF367Q7RTV3 350 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 DENND6BQ8NEG7 585 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 OR2L8Q8NGY9 312 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 SNX33Q8WV41 574 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF416Q9BWM5 594 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 OR51B6Q9H340 312 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 SEC14L4Q9UDX3 406 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 CYB5R1Q9UHQ9 305 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF639Q9UID6 485 aa10.08□□□□□ -0.8
FAM3A-221ENST00000612856 AVPR2P30518 371 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 MAP4K2Q12851 820 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 GRK1Q15835 563 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 C8orf82Q6P1X6 216 aaPredicted RBP10.07□□□□□ -0.8
FAM3A-221ENST00000612856 ZSCAN1Q8NBB4 408 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 C12orf57Q99622 126 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 TSSK6Q9BXA6 273 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 PCDHGA6Q9Y5G7 932 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 ARGFXA6NJG6 315 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 TOR1AO14656 332 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 PIP5K1CO60331 668 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 AHSA1O95433 338 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 P04436 131 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 CELP19835 753 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 F8A1P23610 371 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 GNALP38405 381 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 CDKN2CP42773 168 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 EXOSC2Q13868 293 aaKnown RBP10.07□□□□□ -0.8
FAM3A-221ENST00000612856 AANATQ16613 207 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 TMEM35AQ53FP2 167 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 LHFPL3Q86UP9 236 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 C9orf43Q8TAL5 461 aaPredicted RBP10.07□□□□□ -0.8
FAM3A-221ENST00000612856 DCLRE1CQ96SD1 692 aaKnown RBP10.07□□□□□ -0.8
FAM3A-221ENST00000612856 NIPAL2Q9H841 368 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 FASNP49327 2511 aaKnown RBP10.07□□□□□ -0.8
FAM3A-221ENST00000612856 PRRC2CQ9Y520 2896 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms