RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ST6GAL1P15907 406 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 CTBP2P56545 445 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 VSX2P58304 361 aaPredicted RBP13.56□□□□□ -0.24
CDH1-213ENST00000612417 SIGLEC14Q08ET2 396 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 SRSF5Q13243 272 aaKnown RBP13.56□□□□□ -0.24
CDH1-213ENST00000612417 IL18Q14116 193 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 LYSMD4Q5XG99 296 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 MAMSTRQ6ZN01 415 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 ZNF655Q8N720 491 aaPredicted RBP13.56□□□□□ -0.24
CDH1-213ENST00000612417 COX18Q8N8Q8 333 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 HOXB13Q92826 284 aaPredicted RBP13.56□□□□□ -0.24
CDH1-213ENST00000612417 OTULINQ96BN8 352 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 NECAB3Q96P71 396 aaPredicted RBP13.56□□□□□ -0.24
CDH1-213ENST00000612417 ENKD1Q9H0I2 346 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 TRIM36Q9NQ86 728 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 SIGLEC7Q9Y286 467 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 TMEM131Q92545 1883 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 RHPN2P1A8MT19 583 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 CYR61O00622 381 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 PEX12O00623 359 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 FGF17O60258 216 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 BRINP1O60477 761 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 GPR75O95800 540 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 GKN3PP0CG01 181 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 F8A1P23610 371 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 MRPS15P82914 257 aaKnown RBP13.55□□□□□ -0.24
CDH1-213ENST00000612417 SF3A2Q15428 464 aaKnown RBP13.55□□□□□ -0.24
CDH1-213ENST00000612417 TRAM1Q15629 374 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 PRICKLE4Q2TBC4 344 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 MANEAQ5SRI9 462 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 HBMQ6B0K9 141 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 ZNF613Q6PF04 617 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 GPALPP1Q8IXQ4 340 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 TMEM99Q8N816 258 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 KCTD12Q96CX2 325 aaKnown RBP13.55□□□□□ -0.24
CDH1-213ENST00000612417 BPIFA2Q96DR5 249 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 MARCH7Q9H992 704 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 ATP13A2Q9NQ11 1180 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 STARD5Q9NSY2 213 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 SIRT4Q9Y6E7 314 aaPredicted RBP13.55□□□□□ -0.24
CDH1-213ENST00000612417 SPACA6W5XKT8 324 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 SPTBP11277 2137 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 PCDH15Q96QU1 1955 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 CACNA1EQ15878 2313 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 CCDC163A0A0D9SF12 145 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 SLC9B1P1A6NJY1 282 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 A8MV72 311 aaPredicted RBP13.55□□□□□ -0.24
CDH1-213ENST00000612417 LYRM1O43325 122 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 PLPP2O43688 288 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 FUT1P19526 365 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 PTNP21246 168 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 CAPZA2P47755 286 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 FOXK2Q01167 660 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 PLAURQ03405 335 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 MGAT2Q10469 447 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 AMZ1Q400G9 498 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 C14orf28Q4W4Y0 310 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 THSD4Q6ZMP0 1018 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 RNF44Q7L0R7 432 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 BMP8AQ7Z5Y6 402 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 NR2C2APQ86WQ0 139 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 CDK20Q8IZL9 346 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 CSNK1A1LQ8N752 337 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 SLC37A3Q8NCC5 494 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 PTP4A1Q93096 173 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 CTHRC1Q96CG8 243 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 HCAR1Q9BXC0 346 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 MED20Q9H944 212 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 UCK1Q9HA47 277 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 FBXO34Q9NWN3 711 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 MAT2BQ9NZL9 334 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 NUFIP1Q9UHK0 495 aaKnown RBP13.55□□□□□ -0.24
CDH1-213ENST00000612417 SLC35A3Q9Y2D2 325 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 MRPS2Q9Y399 296 aaKnown RBP13.55□□□□□ -0.24
CDH1-213ENST00000612417 MED31Q9Y3C7 131 aa13.55□□□□□ -0.24
CDH1-213ENST00000612417 ZDBF2Q9HCK1 2354 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 DAPL1A0PJW8 107 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 ZNF860A6NHJ4 632 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 LILRA5A6NI73 299 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 PRR23D1E9PI22 279 aaPredicted RBP13.54□□□□□ -0.24
CDH1-213ENST00000612417 LDB3O75112 727 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 YES1P07947 543 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 PRR23D2P0DMB1 279 aaPredicted RBP13.54□□□□□ -0.24
CDH1-213ENST00000612417 ALAS2P22557 587 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 SLC2A5P22732 501 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 HOXA6P31267 233 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 CAPZBP47756 277 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 CLDN20P56880 219 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 SHC2P98077 582 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 ID2Q02363 134 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 CSTF1Q05048 431 aaKnown RBP13.54□□□□□ -0.24
CDH1-213ENST00000612417 TATDN3Q17R31 274 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 DEFB110Q30KQ9 67 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 TIGD3Q6B0B8 471 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 B3GLCTQ6Y288 498 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 NOXA1Q86UR1 476 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 TCTE3Q8IZS6 198 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 SLC43A2Q8N370 569 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 C19orf47Q8N9M1 422 aaKnown RBP13.54□□□□□ -0.24
CDH1-213ENST00000612417 ASCC1Q8N9N2 400 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms