RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 RNF220Q5VTB9 566 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 REEP3Q6NUK4 255 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 VWA1Q6PCB0 445 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 GRINAQ7Z429 371 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 SNX32Q86XE0 403 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 ZNF440Q8IYI8 595 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 PIGMQ9H3S5 423 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 TIGARQ9NQ88 270 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 JKAMPQ9P055 326 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 ARMCX1Q9P291 453 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 PACSIN3Q9UKS6 424 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 CLEC4AQ9UMR7 237 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 IFT52Q9Y366 437 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 CAPN7Q9Y6W3 813 aa23.31■■□□□ 1.32
VEGFA-226ENST00000611736 SMNDC1O75940 238 aaKnown RBP eCLIP23.3■■□□□ 1.324e-7■■□□□ 12.8
VEGFA-226ENST00000611736 PABPC4LP0CB38 370 aaKnown RBP23.3■■□□□ 1.32
VEGFA-226ENST00000611736 UQCRBP14927 111 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 APOBEC1P41238 236 aaKnown RBP23.3■■□□□ 1.32
VEGFA-226ENST00000611736 KIR2DL2P43627 348 aaPredicted RBP23.3■■□□□ 1.32
VEGFA-226ENST00000611736 CPA2P48052 419 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 GYS2P54840 703 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 MAPRE2Q15555 327 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 ADRM1Q16186 407 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 CYP51A1Q16850 503 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 TRMT5Q32P41 509 aaKnown RBP23.3■■□□□ 1.32
VEGFA-226ENST00000611736 EEF1A1P5Q5VTE0 462 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 LSRQ86X29 649 aaPredicted RBP23.3■■□□□ 1.32
VEGFA-226ENST00000611736 ZNF295-AS1Q8N0V1 137 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 ROBO4Q8WZ75 1007 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 STARD4Q96DR4 205 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 OR5B2Q96R09 309 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 SPATA9Q9BWV2 254 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 FAM107BQ9H098 131 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 TMEM38AQ9H6F2 299 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 CHST2Q9Y4C5 530 aa23.3■■□□□ 1.32
VEGFA-226ENST00000611736 MPDZO75970 2070 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 LOC100653049A0A140TA62 436 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 DYNC1I1O14576 645 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 KRT34O76011 436 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 PLGP00747 810 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-226ENST00000611736 ETS2P15036 469 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 CCNA2P20248 432 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 SLC6A2P23975 617 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 ZNF239Q16600 458 aaKnown RBP23.29■■□□□ 1.32
VEGFA-226ENST00000611736 REP15Q6BDI9 236 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 GDF7Q7Z4P5 450 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 BTLAQ7Z6A9 289 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 CPNE4Q96A23 557 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-226ENST00000611736 REXO5Q96IC2 774 aaKnown RBP23.29■■□□□ 1.32
VEGFA-226ENST00000611736 ELAC2Q9BQ52 826 aaKnown RBP23.29■■□□□ 1.32
VEGFA-226ENST00000611736 SLC39A3Q9BRY0 314 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 RBM24Q9BX46 236 aaKnown RBP23.29■■□□□ 1.32
VEGFA-226ENST00000611736 ARMC7Q9H6L4 198 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 CHRNA9Q9UGM1 479 aa23.29■■□□□ 1.32
VEGFA-226ENST00000611736 MRASO14807 208 aa23.28■■□□□ 1.32
VEGFA-226ENST00000611736 TFPIP10646 304 aa23.28■■□□□ 1.32
VEGFA-226ENST00000611736 AQP1P29972 269 aa23.28■■□□□ 1.32
VEGFA-226ENST00000611736 ZSWIM7Q19AV6 140 aa23.28■■□□□ 1.32
VEGFA-226ENST00000611736 SYT14P1Q58G82 188 aa23.28■■□□□ 1.32
VEGFA-226ENST00000611736 SPATA21Q7Z572 469 aa23.28■■□□□ 1.32
VEGFA-226ENST00000611736 KRT73Q86Y46 540 aa23.28■■□□□ 1.32
VEGFA-226ENST00000611736 SLC25A43Q8WUT9 341 aaPredicted RBP23.28■■□□□ 1.32
VEGFA-226ENST00000611736 FOXD3Q9UJU5 478 aaPredicted RBP23.28■■□□□ 1.32
VEGFA-226ENST00000611736 SPIN1Q9Y657 262 aaPredicted RBP23.28■■□□□ 1.32
VEGFA-226ENST00000611736 BBIP1A8MTZ0 92 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 FAAHO00519 579 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 FRS3O43559 492 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 PRG2P13727 222 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 ADSLP30566 484 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-226ENST00000611736 CPOXP36551 454 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 ACAA2P42765 397 aaKnown RBP23.27■■□□□ 1.32
VEGFA-226ENST00000611736 SLC1A3P43003 542 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 HTR3AP46098 478 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 CYLC2Q14093 348 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-226ENST00000611736 GUSBP1Q15486 140 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 ZNF550Q7Z398 422 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 SERPINA11Q86U17 422 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 ADGRG3Q86Y34 549 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 PTOV1Q86YD1 416 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 CADM2Q8N3J6 435 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 HIPK4Q8NE63 616 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 DNAJA3Q96EY1 480 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 OPN3Q9H1Y3 402 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-226ENST00000611736 GALNT8Q9NY28 637 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 OSGIN1Q9UJX0 560 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 ANGPT4Q9Y264 503 aa23.27■■□□□ 1.32
VEGFA-226ENST00000611736 TMED7-TICAM2A0A0A6YYA0 188 aa23.26■■□□□ 1.31
VEGFA-226ENST00000611736 IGHV3-15A0A0B4J1V0 119 aa23.26■■□□□ 1.31
VEGFA-226ENST00000611736 TACR3P29371 465 aa23.26■■□□□ 1.31
VEGFA-226ENST00000611736 LSP1P33241 339 aa23.26■■□□□ 1.31
VEGFA-226ENST00000611736 POLR2HP52434 150 aaKnown RBP23.26■■□□□ 1.31
VEGFA-226ENST00000611736 CTBP2P56545 445 aa23.26■■□□□ 1.31
VEGFA-226ENST00000611736 MYBPHQ13203 477 aa23.26■■□□□ 1.31
VEGFA-226ENST00000611736 COQ5Q5HYK3 327 aa23.26■■□□□ 1.31
VEGFA-226ENST00000611736 FAM214BQ7L5A3 538 aa23.26■■□□□ 1.31
VEGFA-226ENST00000611736 POU5F2Q8N7G0 328 aa23.26■■□□□ 1.31
VEGFA-226ENST00000611736 C11orf65Q8NCR3 313 aa23.26■■□□□ 1.31
VEGFA-226ENST00000611736 OR10A6Q8NH74 314 aa23.26■■□□□ 1.31
VEGFA-226ENST00000611736 ABHD3Q8WU67 409 aa23.26■■□□□ 1.31
VEGFA-226ENST00000611736 LRRC58Q96CX6 371 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms