RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 CLEC6AQ6EIG7 209 aa13.91□□□□□ -0.18
HDDC2-210ENST00000609574 TRMT10CQ7L0Y3 403 aaKnown RBP13.91□□□□□ -0.18
HDDC2-210ENST00000609574 ARIH2OSQ8N7S6 290 aa13.91□□□□□ -0.18
HDDC2-210ENST00000609574 MNS1Q8NEH6 495 aa13.91□□□□□ -0.18
HDDC2-210ENST00000609574 PIGXQ8TBF5 258 aa13.91□□□□□ -0.18
HDDC2-210ENST00000609574 ZNF75CPQ92670 426 aaPredicted RBP13.91□□□□□ -0.18
HDDC2-210ENST00000609574 THUMPD3Q9BV44 507 aaKnown RBP13.91□□□□□ -0.18
HDDC2-210ENST00000609574 C1QTNF6Q9BXI9 259 aa13.91□□□□□ -0.18
HDDC2-210ENST00000609574 LAT2Q9GZY6 243 aa13.91□□□□□ -0.18
HDDC2-210ENST00000609574 PARPBPQ9NWS1 579 aa13.91□□□□□ -0.18
HDDC2-210ENST00000609574 CCL27Q9Y4X3 112 aa13.91□□□□□ -0.18
HDDC2-210ENST00000609574 ANK2Q01484 3957 aa13.91□□□□□ -0.18
HDDC2-210ENST00000609574 SERINC4A6NH21 518 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 DUXAA6NLW8 204 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 G3V2L1 256 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 CFLARO15519 480 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 URI1O94763 535 aaPredicted RBP13.9□□□□□ -0.18
HDDC2-210ENST00000609574 PGRP06401 933 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 LINC00032P0C843 101 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 CPA3P15088 417 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 APOBEC1P41238 236 aaKnown RBP13.9□□□□□ -0.18
HDDC2-210ENST00000609574 MAGEA8P43361 318 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 WHAMMP3Q1A5X7 153 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 NDUFAF6Q330K2 333 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 RFTN2Q52LD8 501 aaPredicted RBP13.9□□□□□ -0.18
HDDC2-210ENST00000609574 KLHL24Q6TFL4 600 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 DDIASQ8IXT1 998 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 ZNF563Q8TA94 476 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 C3orf49Q96BT1 292 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 MUS81Q96NY9 551 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 KCNS3Q9BQ31 491 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 QRSL1Q9H0R6 528 aaKnown RBP13.9□□□□□ -0.18
HDDC2-210ENST00000609574 ANKZF1Q9H8Y5 726 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 MYOZ1Q9NP98 299 aaPredicted RBP13.9□□□□□ -0.18
HDDC2-210ENST00000609574 TBK1Q9UHD2 729 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 AMDHD2Q9Y303 409 aa13.9□□□□□ -0.18
HDDC2-210ENST00000609574 IGKV3D-15A0A087WSY6 115 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 A0A1W2PR80 420 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 ANKRD28O15084 1053 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 H6PDO95479 791 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 WNT11O96014 354 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 AK1P00568 194 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 CSTAP01040 98 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 TGFAP01135 160 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 IGFBP5P24593 272 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 SESN3P58005 492 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 SNRPD2P62316 118 aaKnown RBP13.89□□□□□ -0.19
HDDC2-210ENST00000609574 PHC1P78364 1004 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 SPOCK1Q08629 439 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 SYT14P1Q58G82 188 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 EXOSC6Q5RKV6 272 aaKnown RBP13.89□□□□□ -0.19
HDDC2-210ENST00000609574 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.89□□□□□ -0.19
HDDC2-210ENST00000609574 EIF3MQ7L2H7 374 aaKnown RBP13.89□□□□□ -0.19
HDDC2-210ENST00000609574 C17orf78Q8N4C9 275 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 FBXO17Q96EF6 278 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 FCRL1Q96LA6 429 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 NMUR2Q9GZQ4 415 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 SIRT3Q9NTG7 399 aaPredicted RBP13.89□□□□□ -0.19
HDDC2-210ENST00000609574 ACER3Q9NUN7 267 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 ATP6V1HQ9UI12 483 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 MID2Q9UJV3 735 aa13.89□□□□□ -0.19
HDDC2-210ENST00000609574 LOC390937A0A1W2PQ73 354 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 VSTM5A8MXK1 200 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 ETV2O00321 342 aaPredicted RBP13.88□□□□□ -0.19
HDDC2-210ENST00000609574 SCAMP2O15127 329 aaKnown RBP13.88□□□□□ -0.19
HDDC2-210ENST00000609574 DNPH1O43598 174 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 BCKDHAP12694 445 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 GCAP28676 217 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 SRP14P37108 136 aaKnown RBP13.88□□□□□ -0.19
HDDC2-210ENST00000609574 NR4A2P43354 598 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 CLK1P49759 484 aaKnown RBP13.88□□□□□ -0.19
HDDC2-210ENST00000609574 PRPS1P60891 318 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 GPR68Q15743 365 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 GABRA6Q16445 453 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 PDZK1Q5T2W1 519 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 LIPMQ5VYY2 423 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 IL17RELQ6ZVW7 336 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 SFXN5Q8TD22 340 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 PPP3R2Q96LZ3 170 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 VRK1Q99986 396 aaPredicted RBP13.88□□□□□ -0.19
HDDC2-210ENST00000609574 NAA11Q9BSU3 229 aaPredicted RBP13.88□□□□□ -0.19
HDDC2-210ENST00000609574 OXSMQ9NWU1 459 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 HDGFL3Q9Y3E1 203 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 TRAF6Q9Y4K3 522 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 PTGDR2Q9Y5Y4 395 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 FREM1Q5H8C1 2179 aa13.88□□□□□ -0.19
HDDC2-210ENST00000609574 LSM1O15116 133 aaKnown RBP13.87□□□□□ -0.19
HDDC2-210ENST00000609574 RIPK2O43353 540 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 TCF21O43680 179 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 STX11O75558 287 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 LYPLA1O75608 230 aaPredicted RBP13.87□□□□□ -0.19
HDDC2-210ENST00000609574 PMS2P2O95744 297 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 PROCP04070 461 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 ERCC1P07992 297 aaPredicted RBP13.87□□□□□ -0.19
HDDC2-210ENST00000609574 UBTFL6P0CB48 400 aaPredicted RBP13.87□□□□□ -0.19
HDDC2-210ENST00000609574 EDNRAP25101 427 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 OR2B6P58173 313 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 ABLIM2Q6H8Q1 611 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 CASP12Q6UXS9 341 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 B3GLCTQ6Y288 498 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms