RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 WSCD1Q658N2 575 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 PDPK2PQ6A1A2 396 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 ZNF613Q6PF04 617 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 COMTD1Q86VU5 262 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 CDR2LQ86X02 465 aaPredicted RBP4.09□□□□□ -1.75
LINC00397-202ENST00000606785 CCDC50Q8IVM0 306 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 ZNF565Q8N9K5 539 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 MFSD9Q8NBP5 474 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 OR9A4Q8NGU2 314 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 CDC26Q8NHZ8 85 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 SLC2A14Q8TDB8 520 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 DDI1Q8WTU0 396 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 DNASE2BQ8WZ79 361 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 KIFAP3Q92845 792 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 C19orf60Q96EN9 201 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 OR5B2Q96R09 309 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 HCAR1Q9BXC0 346 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 UCK1Q9HA47 277 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 SLC39A1Q9NY26 324 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 DDX19BQ9UMR2 479 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 SCML2Q9UQR0 700 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 CBY1Q9Y3M2 126 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 TTC41PQ6P2S7 1318 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 TNIKQ9UKE5 1360 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 NCOA3Q9Y6Q9 1424 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 NISCHQ9Y2I1 1504 aa4.09□□□□□ -1.75
LINC00397-202ENST00000606785 A0A1B0GTH9 108 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 SAGE2PA6NJ88 616 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 LRRIQ3A6PVS8 624 aaPredicted RBP4.08□□□□□ -1.76
LINC00397-202ENST00000606785 H3BMQ9 156 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 GOLGA8MH3BSY2 632 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 NDUFB10O96000 172 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 PGK1P00558 417 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 HPP00738 406 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 SERPINB2P05120 415 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 H2AFZP0C0S5 128 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 UBTFL6P0CB48 400 aaPredicted RBP4.08□□□□□ -1.76
LINC00397-202ENST00000606785 CYP2B6P20813 491 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 IMPDH1P20839 514 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 S100A1P23297 94 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 ACVR1BP36896 505 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 ETV5P41161 510 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 CBX5P45973 191 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 CRIP2P52943 208 aaPredicted RBP4.08□□□□□ -1.76
LINC00397-202ENST00000606785 MAP3K7CLP57077 242 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 VBP1P61758 197 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 PUDPQ08623 228 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 ELAVL2Q12926 359 aaKnown RBP4.08□□□□□ -1.76
LINC00397-202ENST00000606785 CUL1Q13616 776 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 ABRAXAS2Q15018 415 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 HADHQ16836 314 aaKnown RBP4.08□□□□□ -1.76
LINC00397-202ENST00000606785 MICAQ29983 383 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 SLC25A52Q3SY17 297 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 CCDC153Q494R4 210 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 ZNF506Q5JVG8 444 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 ZNF57Q68EA5 555 aaPredicted RBP4.08□□□□□ -1.76
LINC00397-202ENST00000606785 CCDC171Q6TFL3 1326 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 REG3GQ6UW15 175 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 TRPV1Q8NER1 839 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 OR2T33Q8NG76 320 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 EFHD2Q96C19 240 aaPredicted RBP4.08□□□□□ -1.76
LINC00397-202ENST00000606785 TMEM80Q96HE8 168 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 COPS8Q99627 209 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 CITED1Q99966 193 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 BCL7BQ9BQE9 202 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 NIPSNAP3BQ9BS92 247 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 CHRDL1Q9BU40 450 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 GLIPR2Q9H4G4 154 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 HAUS4Q9H6D7 363 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 BATF3Q9NR55 127 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 WRAP73Q9P2S5 460 aaPredicted RBP4.08□□□□□ -1.76
LINC00397-202ENST00000606785 IFT52Q9Y366 437 aa4.08□□□□□ -1.76
LINC00397-202ENST00000606785 AK6Q9Y3D8 172 aaKnown RBP4.08□□□□□ -1.76
LINC00397-202ENST00000606785 IGHV3OR16-10A0A075B7F0 116 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 IGHV2-70DA0A0C4DH43 119 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.07□□□□□ -1.76
LINC00397-202ENST00000606785 A0A1B0GVL5 298 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.07□□□□□ -1.76
LINC00397-202ENST00000606785 OR6C74A6NCV1 312 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 OR5K4A6NMS3 321 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 ZNF487B1APH4 448 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 NDUFS8O00217 210 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 RS1O15537 224 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 KLHL2O95198 593 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 KRT14P02533 472 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 ALPIP09923 528 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 UMPSP11172 480 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 PRKACBP22694 351 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 IL32P24001 234 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 ALDH3B2P48448 385 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 ATP12AP54707 1039 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 PRMT2P55345 433 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 MYL6P60660 151 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 ERVK11-1P61568 191 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 OC90Q02509 493 aaPredicted RBP4.07□□□□□ -1.76
LINC00397-202ENST00000606785 KDSRQ06136 332 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 CD300CQ08708 224 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 ST3GAL3Q11203 375 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 COTL1Q14019 142 aa4.07□□□□□ -1.76
LINC00397-202ENST00000606785 SPCS2Q15005 226 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms