RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ARFGAP2Q8N6H7 521 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 SLC38A5Q8WUX1 472 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 MAL2Q969L2 176 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 TMEM19Q96HH6 336 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 ARL5BQ96KC2 179 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 PSD2Q9BQI7 771 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 MED18Q9BUE0 208 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 CCDC28BQ9BUN5 200 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 OR11A1Q9GZK7 315 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 PLEKHF2Q9H8W4 249 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 SLC52A3Q9NQ40 469 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 EXOSC3Q9NQT5 275 aaKnown RBP10.95□□□□□ -0.66
CTSA-210ENST00000606000 ELOVL5Q9NYP7 299 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 SLAMF8Q9P0V8 285 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 KLHL13Q9P2N7 655 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 P2RX2Q9UBL9 471 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 NDRG3Q9UGV2 375 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 LIPT1Q9Y234 373 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 HRNRQ86YZ3 2850 aaPredicted RBP10.94□□□□□ -0.66
CTSA-210ENST00000606000 C16orf97H3BN30 126 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 TGDSO95455 350 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 THBDP07204 575 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 FESP07332 822 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 GKN3PP0CG01 181 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 TFPIP10646 304 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 IL7RP16871 459 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 MRPL19P49406 292 aaKnown RBP10.94□□□□□ -0.66
CTSA-210ENST00000606000 DIO1P49895 249 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 SYT14P1Q58G82 188 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 BLOC1S3Q6QNY0 202 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 PAMR1Q6UXH9 720 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 TFAP2EQ6VUC0 442 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 STAC2Q6ZMT1 411 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 GRINAQ7Z429 371 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 ADGRG3Q86Y34 549 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 OR52P1PQ8NH57 321 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 OIT3Q8WWZ8 545 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 TMEM234Q8WY98 164 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 ZNF775Q96BV0 537 aaPredicted RBP10.94□□□□□ -0.66
CTSA-210ENST00000606000 PIK3IP1Q96FE7 263 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 REXO5Q96IC2 774 aaKnown RBP10.94□□□□□ -0.66
CTSA-210ENST00000606000 MAGEB18Q96M61 343 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 HS3ST6Q96QI5 342 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 SLC39A3Q9BRY0 314 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 TIGARQ9NQ88 270 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 CHRNA9Q9UGM1 479 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 PRSS50Q9UI38 385 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 DCTN4Q9UJW0 460 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 CHST2Q9Y4C5 530 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 AKAP9Q99996 3911 aa10.94□□□□□ -0.66
CTSA-210ENST00000606000 A0A096LPI6 279 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 TMEM72A0PK05 275 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 ZC3H12DA2A288 527 aaKnown RBP10.93□□□□□ -0.66
CTSA-210ENST00000606000 ZNF814B7Z6K7 855 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 CLIC1O00299 241 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 CASKO14936 926 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 RAMP1O60894 148 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 PRKD3O94806 890 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 DBIP07108 87 aaKnown RBP10.93□□□□□ -0.66
CTSA-210ENST00000606000 PRG2P13727 222 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 CRYGSP22914 178 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 LOXP28300 417 aaPredicted RBP10.93□□□□□ -0.66
CTSA-210ENST00000606000 TACR3P29371 465 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 CRISP3P54108 245 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 RAC3P60763 192 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 TXNL4AP83876 142 aaKnown RBP10.93□□□□□ -0.66
CTSA-210ENST00000606000 EPS8Q12929 822 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 RNPS1Q15287 305 aaKnown RBP10.93□□□□□ -0.66
CTSA-210ENST00000606000 RGNQ15493 299 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 AGKQ53H12 422 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 TMEM201Q5SNT2 666 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 CXorf67Q86X51 503 aaPredicted RBP10.93□□□□□ -0.66
CTSA-210ENST00000606000 CMIPQ8IY22 773 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 CLIP4Q8N3C7 705 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 SPDL1Q96EA4 605 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 RSPO3Q9BXY4 272 aaPredicted RBP10.93□□□□□ -0.66
CTSA-210ENST00000606000 IKZF5Q9H5V7 419 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 MTHFD2LQ9H903 347 aaPredicted RBP10.93□□□□□ -0.66
CTSA-210ENST00000606000 NPHS2Q9NP85 383 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 SERINC1Q9NRX5 453 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 GLRX2Q9NS18 164 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 VAPAQ9P0L0 249 aa10.93□□□□□ -0.66
CTSA-210ENST00000606000 ZNF443Q9Y2A4 671 aaPredicted RBP10.93□□□□□ -0.66
CTSA-210ENST00000606000 POLQO75417 2590 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 TRBV5-3A0A0A0MS03 114 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 TMED7-TICAM2A0A0A6YYA0 188 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 CDHR4A6H8M9 788 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 CFAP73A6NFT4 308 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 SULT2B1O00204 365 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 FRS3O43559 492 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 CYTIPO60759 359 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 EDF1O60869 148 aaKnown RBP10.92□□□□□ -0.66
CTSA-210ENST00000606000 GCM2O75603 506 aaPredicted RBP10.92□□□□□ -0.66
CTSA-210ENST00000606000 ATE1O95260 518 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 APOBEC1P41238 236 aaKnown RBP10.92□□□□□ -0.66
CTSA-210ENST00000606000 PCYT1AP49585 367 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 RASGEF1BQ0VAM2 473 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 SF3A3Q12874 501 aaKnown RBP eCLIP10.92□□□□□ -0.661e-6■■□□□ 14.5
CTSA-210ENST00000606000 SQLEQ14534 574 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 LIN52Q52LA3 116 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms