RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 FAM187AA6NFU0 413 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 ZNF716A6NP11 495 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 PDE5AO76074 875 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 CRYAAP02489 173 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 ENO1P06733 434 aaKnown RBP13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 TFPIP10646 304 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 PGCP20142 388 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 TAC1P20366 129 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 SLC1A3P43003 542 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 SLC25A3Q00325 362 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 CAV1Q03135 178 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 TRIP10Q15642 601 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 NDUFAF6Q330K2 333 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 MIDNQ504T8 468 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 TEX29Q8N6K0 151 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 OR5W2Q8NH69 310 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 PIGXQ8TBF5 258 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 TMEM186Q96B77 213 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 C16orf58Q96GQ5 468 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 QRSL1Q9H0R6 528 aaKnown RBP13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 PLK3Q9H4B4 646 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 HIF1ANQ9NWT6 349 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 GRHL1Q9NZI5 618 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 USP22Q9UPT9 525 aa13.4□□□□□ -0.26
NEDD8-MDP1-204ENST00000605847 VSTM5A8MXK1 200 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 PHBP35232 272 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 MAGEA8P43361 318 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 EFNB3Q15768 340 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 KLHL26Q53HC5 615 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SYT14P1Q58G82 188 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ZNF678Q5SXM1 525 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 TREML4Q6UXN2 200 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ZNF786Q8N393 782 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 FAM76AQ8TAV0 307 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SLC25A43Q8WUT9 341 aaPredicted RBP13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 CDS1Q92903 461 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 CIDECQ96AQ7 238 aaPredicted RBP13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 KCNA7Q96RP8 456 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ZNF747Q9BV97 191 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 PARPBPQ9NWS1 579 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SPEF1Q9Y4P9 236 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SPIN1Q9Y657 262 aaPredicted RBP13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SAR1BQ9Y6B6 198 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 TGP01266 2768 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 PLCE1Q9P212 2302 aa13.39□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SERTM1A2A2V5 107 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 KLF11O14901 512 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ZNF264O43296 627 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ZSCAN12O43309 604 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 EIF4E2O60573 245 aaKnown RBP13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 CYP7B1O75881 506 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 INHBAP08476 426 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 UBL4AP11441 157 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 CDH2P19022 906 aaPredicted RBP13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 EPHA1P21709 976 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 GUCY2DQ02846 1103 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 MERTKQ12866 999 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ADIPOQQ15848 244 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 UNC50Q53HI1 259 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ANKRD26P1Q6NSI1 321 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 NOXRED1Q6NXP6 359 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 CDC73Q6P1J9 531 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 LRRC17Q8N6Y2 441 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 FBXO25Q8TCJ0 367 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 UBASH3BQ8TF42 649 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 TMEM234Q8WY98 164 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SLC38A2Q96QD8 506 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 STACQ99469 402 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 KATNB1Q9BVA0 655 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 LPAR2Q9HBW0 351 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 DUSP22Q9NRW4 184 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 UTP11Q9Y3A2 253 aaKnown RBP13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 DTNAQ9Y4J8 743 aa13.38□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 IGHV1-18A0A0C4DH31 117 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 PDLIM1O00151 329 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 MPGP29372 298 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 NTF4P34130 210 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 MAGEA12P43365 314 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ARFIP2P53365 341 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ATP12AP54707 1039 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 PKNOX1P55347 436 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 LCP2Q13094 533 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 RIN1Q13671 783 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 FAHD2BQ6P2I3 314 aaPredicted RBP13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ST8SIA1Q92185 356 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 MRPL24Q96A35 216 aaKnown RBP13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ZNF524Q96C55 264 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 PPCDCQ96CD2 204 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 FAHD2AQ96GK7 314 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 EGLN2Q96KS0 407 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 TMEM237Q96Q45 408 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 LRRC37BQ96QE4 947 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 THUMPD3Q9BV44 507 aaKnown RBP13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SUCNR1Q9BXA5 334 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 PIGUQ9H490 435 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 DYNLRB1Q9NP97 96 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SLC7A10Q9NS82 523 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ZCCHC3Q9NUD5 404 aaKnown RBP13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SH3BP4Q9P0V3 963 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms