RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 GEMIN6Q8WXD5 167 aaKnown RBP3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 CXorf40BQ96DE9 158 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 MRPL38Q96DV4 380 aaKnown RBP3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 HBEGFQ99075 208 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 DDOQ99489 341 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 TEAD3Q99594 435 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 TSNAXQ99598 290 aaKnown RBP3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 SEPT5Q99719 369 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 PRRX2Q99811 253 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 CMSS1Q9BQ75 279 aaKnown RBP3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF649Q9BS31 505 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 WRAP53Q9BUR4 548 aaKnown RBP3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 MRI1Q9BV20 369 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 TM6SF2Q9BZW4 377 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC39A8Q9C0K1 460 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 SPRTNQ9H040 489 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR10A2Q9H208 303 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 CDCP1Q9H5V8 836 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 TPT1P8Q9HAU6 139 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 SARS2Q9NP81 518 aaKnown RBP3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 MRPS30Q9NP92 439 aaKnown RBP3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 SMCO4Q9NRQ5 59 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 C19orf12Q9NSK7 152 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 C14orf105Q9NVL8 296 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR6C2Q9NZP2 312 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 CLCA2Q9UQC9 943 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 PLEKHA6Q9Y2H5 1048 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 CRYL1Q9Y2S2 319 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 PLEKHM1Q9Y4G2 1056 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 RLFQ13129 1914 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 PLXNB2O15031 1838 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 LOC285556D6RIA3 1793 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 BLACEA4D250 179 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR6C68A6NDL8 312 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 GLTPD2A6NH11 291 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 KDM4EB2RXH2 506 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 LRRN3E7EW58 273 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 AP4M1O00189 453 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 TAPBPO15533 448 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 FFAR2O15552 330 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 EEF1E1O43324 174 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SH3BGRLO75368 114 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 NDUFS3O75489 264 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 RBBP9O75884 186 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 KDM4BO94953 1096 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 NDUFB6O95139 128 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 F2P00734 622 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 CD8AP01732 235 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 HOXB5P09067 269 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 CBSLP0DN79 551 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 HKR1P10072 659 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF44P15621 663 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 MUC1P15941 1255 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 AMD1P17707 334 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 IDSP22304 550 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 UQCRC2P22695 453 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 AKAP5P24588 427 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 FPR3P25089 353 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 CERS1P27544 350 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 CBSP35520 551 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 RPL3P39023 403 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 PTGER3P43115 390 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 RABIFP47224 123 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 LHX1P48742 406 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 TTPAP49638 278 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 RBP2P50120 134 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 XKP51811 444 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ARFIP1P53367 373 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 RABGGTBP53611 331 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 CDH12P55289 794 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 NRG3P56975 720 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 RPL38P63173 70 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC7A9P82251 487 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 PLIN5Q00G26 463 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SPIBQ01892 262 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 NAAAQ02083 359 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 PDZK1IP1Q13113 114 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SRSF5Q13243 272 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC14A1Q13336 389 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 PCOLCEQ15113 449 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 HMGN3Q15651 99 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 MAPK14Q16539 360 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 UGT8Q16880 541 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SYT14P1Q58G82 188 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 XKR4Q5GH76 650 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SIRPB2Q5JXA9 342 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ENTPD8Q5MY95 495 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 DACT2Q5SW24 774 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 HENMT1Q5T8I9 393 aaKnown RBP3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 FAM219BQ5XKK7 198 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SBSNQ6UWP8 590 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ALKAL2Q6UX46 152 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 DRAM2Q6UX65 266 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ANGPTL8Q6UXH0 198 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 IL34Q6ZMJ4 242 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 Q6ZTK2 550 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 PAQR9Q6ZVX9 377 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 ASB18Q6ZVZ8 466 aa3.76□□□□□ -1.81
HMGB1P50-201ENST00000605814 SSX9Q7RTT3 188 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms