RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 VRK2Q86Y07 508 aa21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 ZNF440Q8IYI8 595 aa21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 C10orf111Q8N326 155 aa21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 ATP6V1C2Q8NEY4 427 aa21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 BBS10Q8TAM1 723 aa21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 RNF128Q8TEB7 428 aa21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 SLC25A43Q8WUT9 341 aaPredicted RBP21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 ZNF559Q9BR84 538 aa21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 SERINC1Q9NRX5 453 aa21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 GLRX2Q9NS18 164 aa21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 ZNF443Q9Y2A4 671 aaPredicted RBP21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 ANKRD17O75179 2603 aaKnown RBP21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 MYO9AB2RTY4 2548 aa21.66■■□□□ 1.06
UBE2E3-213ENST00000602959 CSMD2Q7Z408 3487 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 MPDZO75970 2070 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 CFAP73A6NFT4 308 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 AP3D1O14617 1153 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 PABPC4LP0CB38 370 aaKnown RBP21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 ARAFP10398 606 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 EPS8Q12929 822 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 LARS2Q15031 903 aaKnown RBP21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 GCNT6Q5T4J0 391 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 DHDDSQ86SQ9 333 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 LURAP1Q96LR2 239 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 CPPED1Q9BRF8 314 aaPredicted RBP21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 CTPS2Q9NRF8 586 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 RLIMQ9NVW2 624 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 CRIM1Q9NZV1 1036 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 CHRNA9Q9UGM1 479 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 PRDM4Q9UKN5 801 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 IFT52Q9Y366 437 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 EMC9Q9Y3B6 208 aa21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 SPIN1Q9Y657 262 aaPredicted RBP21.65■■□□□ 1.06
UBE2E3-213ENST00000602959 EVPLLA8MZ36 301 aa21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 SMNDC1O75940 238 aaKnown RBP eCLIP21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 PLGP00747 810 aaPredicted RBP21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 UQCRBP14927 111 aa21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 HTR3AP46098 478 aa21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 IDH2P48735 452 aaKnown RBP21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 RAC3P60763 192 aa21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 SYT14P1Q58G82 188 aa21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 RUNDC3AQ59EK9 446 aa21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 OR6K3Q8NGY3 331 aa21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 FAM222BQ8WU58 562 aa21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 REXO5Q96IC2 774 aaKnown RBP21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 TMEM38AQ9H6F2 299 aa21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 CACYBPQ9HB71 228 aaKnown RBP21.64■■□□□ 1.05
UBE2E3-213ENST00000602959 A0A1W2PNR3 127 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 C5orf58C9J3I9 102 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 PGM3O95394 542 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 ETS2P15036 469 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 GTF2IRD2BQ6EKJ0 949 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 ZNF474Q6S9Z5 364 aaPredicted RBP21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 GTF2IRD2Q86UP8 949 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 ZZZ3Q8IYH5 903 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 ROBO4Q8WZ75 1007 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 ZNF317Q96PQ6 595 aaPredicted RBP21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 OR5B2Q96R09 309 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 CGREF1Q99674 301 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 SPATA9Q9BWV2 254 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 OPN3Q9H1Y3 402 aaPredicted RBP21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 KLHL14Q9P2G3 628 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 CLEC4AQ9UMR7 237 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 PROCRQ9UNN8 238 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 ZNF232Q9UNY5 417 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 CHST2Q9Y4C5 530 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 SPG11Q96JI7 2443 aa21.63■■□□□ 1.05
UBE2E3-213ENST00000602959 TUBAL3A6NHL2 446 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 FKBP2P26885 142 aaKnown RBP21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 CPOXP36551 454 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 SLC1A3P43003 542 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 CTBP2P56545 445 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 RNPS1Q15287 305 aaKnown RBP21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 REEP3Q6NUK4 255 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 FCRLAQ7L513 359 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 ADGRG3Q86Y34 549 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 NFKBIDQ8NI38 313 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 ABHD3Q8WU67 409 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 ANKRD27Q96NW4 1050 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 ARMC7Q9H6L4 198 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 GP6Q9HCN6 339 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 SAR1AQ9NR31 198 aa21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 HRNRQ86YZ3 2850 aaPredicted RBP21.62■■□□□ 1.05
UBE2E3-213ENST00000602959 AGTR1P30556 359 aa21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 ACAA2P42765 397 aaKnown RBP21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 CLK1P49759 484 aaKnown RBP21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 POLR2HP52434 150 aaKnown RBP21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 KRTAP10-9P60411 292 aa21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 CDK6Q00534 326 aa21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 ADRM1Q16186 407 aa21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 ZNF311Q5JNZ3 666 aa21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 TMPPEQ6ZT21 453 aa21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 ZNF550Q7Z398 422 aa21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 SLC43A2Q8N370 569 aa21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 CLIP4Q8N3C7 705 aa21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 SLC35B4Q969S0 331 aa21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 PLSCR4Q9NRQ2 329 aa21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 ELOVL5Q9NYP7 299 aa21.61■■□□□ 1.05
UBE2E3-213ENST00000602959 OSGIN1Q9UJX0 560 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms