RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 HOXD1Q9GZZ0 328 aa11.8□□□□□ -0.52
SUPT5H-220ENST00000601978 SHARPINQ9H0F6 387 aa11.8□□□□□ -0.52
SUPT5H-220ENST00000601978 REEP4Q9H6H4 257 aa11.8□□□□□ -0.52
SUPT5H-220ENST00000601978 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.8□□□□□ -0.52
SUPT5H-220ENST00000601978 POLR3GO15318 223 aaPredicted RBP11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 LMX1BO60663 402 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 SEC22BO75396 215 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 CSF3P09919 207 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 IGHV4-31P0DP07 118 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 PRKCAP17252 672 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 PTNP21246 168 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 PTAFRP25105 342 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 SELENBP1Q13228 472 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 PDE7AQ13946 482 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 ZNF385BQ569K4 471 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 XKR7Q5GH72 579 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 CCNJQ5T5M9 372 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 RNF165Q6ZSG1 346 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 FBXL14Q8N1E6 418 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 ZNF433Q8N7K0 673 aaPredicted RBP11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 ZNF527Q8NB42 609 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 OR2T11Q8NH01 316 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 C10orf105Q8TEF2 133 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 FAM168AQ92567 244 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 PPCDCQ96CD2 204 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 C16orf58Q96GQ5 468 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 FCRL1Q96LA6 429 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 PPP1R36Q96LQ0 422 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 CCT7Q99832 543 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 PIGUQ9H490 435 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 CCDC134Q9H6E4 229 aa11.79□□□□□ -0.52
SUPT5H-220ENST00000601978 IGHV3-15A0A0B4J1V0 119 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 H3BNH8 94 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 OIP5O43482 229 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 EDF1O60869 148 aaKnown RBP11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 NUDT14O95848 222 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 LINC00032P0C843 101 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 EDNRAP25101 427 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 SLC7A1P30825 629 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 MLC1Q15049 377 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 TOMM34Q15785 309 aaPredicted RBP11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 ANKRD26P1Q6NSI1 321 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 ZNF544Q6NX49 715 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 MAVSQ7Z434 540 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 PIAS4Q8N2W9 510 aaPredicted RBP11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 MUC15Q8N387 334 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 ZNF525Q8N782 197 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 FBXO30Q8TB52 745 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 ZNF300Q96RE9 604 aaPredicted RBP11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 NUF2Q9BZD4 464 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 FGFR1OP2Q9NVK5 253 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 C1orf109Q9NX04 203 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 SH3BP4Q9P0V3 963 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 CARD8Q9Y2G2 431 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 SLC25A15Q9Y619 301 aa11.78□□□□□ -0.52
SUPT5H-220ENST00000601978 IGKV3D-15A0A087WSY6 115 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 A0A1W2PNR3 127 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 NPIPB9F8W1W9 429 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 SLC28A1O00337 649 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 SMAD9O15198 467 aaKnown RBP11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 HDAC3O15379 428 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 DNAJA2O60884 412 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 HMGN2P05204 90 aaKnown RBP11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 VIMP08670 466 aaKnown RBP11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 SRD5A1P18405 259 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 SDC1P18827 310 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 ATP6V1C1P21283 382 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 USF1P22415 310 aaPredicted RBP11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 CD40P25942 277 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 GZMKP49863 264 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 EFNA4P52798 201 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 RPL38P63173 70 aaKnown RBP11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 LSM11P83369 360 aaKnown RBP eCLIP11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 PDK3Q15120 406 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 FBXW9Q5XUX1 488 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 SLC22A25Q6T423 547 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 KLHL17Q6TDP4 642 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 SZRD1Q7Z422 152 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 GALNT5Q7Z7M9 940 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 ZNF100Q8IYN0 542 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 ATP6V1C2Q8NEY4 427 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 OR5W2Q8NH69 310 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 ZNF524Q96C55 264 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 MTERF3Q96E29 417 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 FAM120BQ96EK7 910 aaKnown RBP11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 C3orf30Q96M34 536 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 SIRT3Q9NTG7 399 aaPredicted RBP11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 GIMAP2Q9UG22 337 aa11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 HEATR1Q9H583 2144 aaKnown RBP11.77□□□□□ -0.53
SUPT5H-220ENST00000601978 C9JVG2 144 aa11.76□□□□□ -0.53
SUPT5H-220ENST00000601978 HAX1O00165 279 aa11.76□□□□□ -0.53
SUPT5H-220ENST00000601978 GTPBP1O00178 669 aaKnown RBP11.76□□□□□ -0.53
SUPT5H-220ENST00000601978 LSM1O15116 133 aaKnown RBP11.76□□□□□ -0.53
SUPT5H-220ENST00000601978 AKAP10O43572 662 aa11.76□□□□□ -0.53
SUPT5H-220ENST00000601978 EIF4E2O60573 245 aaKnown RBP11.76□□□□□ -0.53
SUPT5H-220ENST00000601978 BMP4P12644 408 aa11.76□□□□□ -0.53
SUPT5H-220ENST00000601978 IGFBP5P24593 272 aa11.76□□□□□ -0.53
SUPT5H-220ENST00000601978 FABP6P51161 128 aa11.76□□□□□ -0.53
SUPT5H-220ENST00000601978 ATP12AP54707 1039 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms