RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 HMGN2P46Q86SG4 172 aa15.36■□□□□ 0.05
HERC3-214ENST00000601319 ZNF440Q8IYI8 595 aa15.36■□□□□ 0.05
HERC3-214ENST00000601319 ZNF563Q8TA94 476 aa15.36■□□□□ 0.05
HERC3-214ENST00000601319 CNOT9Q92600 299 aaKnown RBP15.36■□□□□ 0.05
HERC3-214ENST00000601319 REXO5Q96IC2 774 aaKnown RBP15.36■□□□□ 0.05
HERC3-214ENST00000601319 SLC39A3Q9BRY0 314 aa15.36■□□□□ 0.05
HERC3-214ENST00000601319 TACO1Q9BSH4 297 aaKnown RBP15.36■□□□□ 0.05
HERC3-214ENST00000601319 NPHS2Q9NP85 383 aa15.36■□□□□ 0.05
HERC3-214ENST00000601319 PLSCR4Q9NRQ2 329 aa15.36■□□□□ 0.05
HERC3-214ENST00000601319 SERINC1Q9NRX5 453 aa15.36■□□□□ 0.05
HERC3-214ENST00000601319 RASSF1Q9NS23 344 aa15.36■□□□□ 0.05
HERC3-214ENST00000601319 A0A0G2JPF8 293 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 A0A1W2PP18 115 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 CDHR4A6H8M9 788 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 TMEM247A6NEH6 219 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 HNRNPCL2B2RXH8 293 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 HNRNPCL3B7ZW38 293 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 HNRNPCL1O60812 293 aaKnown RBP15.35■□□□□ 0.05
HERC3-214ENST00000601319 ADAM11O75078 769 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 HNRNPCL4P0DMR1 293 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 UQCRBP14927 111 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 CCKARP32238 428 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 HTR3AP46098 478 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 LIN52Q52LA3 116 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 AGKQ53H12 422 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 SYT14P1Q58G82 188 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 MSRB3Q8IXL7 192 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 SLC43A2Q8N370 569 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 OR52P1PQ8NH57 321 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 TMEM19Q96HH6 336 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 GPATCH1Q9BRR8 931 aaKnown RBP15.35■□□□□ 0.05
HERC3-214ENST00000601319 CLEC4MQ9H2X3 399 aaPredicted RBP15.35■□□□□ 0.05
HERC3-214ENST00000601319 BCL2L10Q9HD36 194 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 KLHL13Q9P2N7 655 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 CHRNA9Q9UGM1 479 aa15.35■□□□□ 0.05
HERC3-214ENST00000601319 RYKP34925 604 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 UGT2B10P36537 528 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 CLK1P49759 484 aaKnown RBP15.34■□□□□ 0.05
HERC3-214ENST00000601319 MAP2K6P52564 334 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 PAGE3Q5JUK9 113 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 METTL21CQ5VZV1 264 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 FCRLAQ7L513 359 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 ZNF610Q8N9Z0 462 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 ATP6V1C2Q8NEY4 427 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 LINC01560Q8TB33 94 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 ABHD3Q8WU67 409 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 POLDIP3Q9BY77 421 aaKnown RBP15.34■□□□□ 0.05
HERC3-214ENST00000601319 VAPAQ9P0L0 249 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 NDRG3Q9UGV2 375 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 DCTN4Q9UJW0 460 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 CLEC4AQ9UMR7 237 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 CORO2BQ9UQ03 480 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 ZNF443Q9Y2A4 671 aaPredicted RBP15.34■□□□□ 0.05
HERC3-214ENST00000601319 ABCA4P78363 2273 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 FREM1Q5H8C1 2179 aa15.34■□□□□ 0.05
HERC3-214ENST00000601319 UQCRHLA0A096LP55 91 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 A0A1W2PNR3 127 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 CFAP73A6NFT4 308 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 AP3D1O14617 1153 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 SMAD9O15198 467 aaKnown RBP15.33■□□□□ 0.04
HERC3-214ENST00000601319 DNPH1O43598 174 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 POU2F1P14859 743 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 CSNK2A1P68400 391 aaPredicted RBP15.33■□□□□ 0.04
HERC3-214ENST00000601319 FAM27E3Q08E93 113 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 EPS8Q12929 822 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 LARS2Q15031 903 aaKnown RBP15.33■□□□□ 0.04
HERC3-214ENST00000601319 RPS26P11Q5JNZ5 115 aaPredicted RBP15.33■□□□□ 0.04
HERC3-214ENST00000601319 ZNF836Q6ZNA1 936 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 LURAP1LQ8IV03 231 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 BBS10Q8TAM1 723 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 TSPEARQ8WU66 669 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 ROBO4Q8WZ75 1007 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 THOC1Q96FV9 657 aaKnown RBP15.33■□□□□ 0.04
HERC3-214ENST00000601319 OR5B2Q96R09 309 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 BCO1Q9HAY6 547 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 CACYBPQ9HB71 228 aaKnown RBP15.33■□□□□ 0.04
HERC3-214ENST00000601319 FANCFQ9NPI8 374 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 MED4Q9NPJ6 270 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 CTPS2Q9NRF8 586 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 MRGBPQ9NV56 204 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 SLAMF8Q9P0V8 285 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 HDGFL3Q9Y3E1 203 aa15.33■□□□□ 0.04
HERC3-214ENST00000601319 MAP1AP78559 2803 aaPredicted RBP15.33■□□□□ 0.04
HERC3-214ENST00000601319 A0A0G2JND7 137 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 C16orf97H3BN30 126 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 ZNF208O43345 1280 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 CYTIPO60759 359 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 PRKD3O94806 890 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 PMS2P2O95744 297 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 NUDT7P0C024 238 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 NCF2P19878 526 aaPredicted RBP15.32■□□□□ 0.04
HERC3-214ENST00000601319 ENPP1P22413 925 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 SLC1A3P43003 542 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 IDH2P48735 452 aaKnown RBP15.32■□□□□ 0.04
HERC3-214ENST00000601319 DIO1P49895 249 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 POLR2HP52434 150 aaKnown RBP15.32■□□□□ 0.04
HERC3-214ENST00000601319 TMEM201Q5SNT2 666 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 TMPPEQ6ZT21 453 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 BEND4Q6ZU67 534 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 STK32CQ86UX6 486 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms