RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 SLC36A3Q495N2 470 aa20.53■□□□□ 0.88
IRF3-228ENST00000601291 TTC23Q5W5X9 447 aa20.53■□□□□ 0.88
IRF3-228ENST00000601291 CCDC81Q6ZN84 652 aa20.53■□□□□ 0.88
IRF3-228ENST00000601291 ZNF227Q86WZ6 799 aa20.53■□□□□ 0.88
IRF3-228ENST00000601291 OR1J4Q8NGS1 313 aa20.53■□□□□ 0.88
IRF3-228ENST00000601291 FAM46AQ96IP4 442 aaKnown RBP20.53■□□□□ 0.88
IRF3-228ENST00000601291 GABARAPL3Q9BY60 117 aa20.53■□□□□ 0.88
IRF3-228ENST00000601291 SLC19A3Q9BZV2 496 aa20.53■□□□□ 0.88
IRF3-228ENST00000601291 RNF32Q9H0A6 362 aa20.53■□□□□ 0.88
IRF3-228ENST00000601291 ZNF552Q9H707 407 aaPredicted RBP20.53■□□□□ 0.88
IRF3-228ENST00000601291 PROK2Q9HC23 129 aa20.53■□□□□ 0.88
IRF3-228ENST00000601291 LRCH1Q9Y2L9 728 aa20.53■□□□□ 0.88
IRF3-228ENST00000601291 CPAMD8Q8IZJ3 1885 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 OR5H15A6NDH6 313 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 G3V3Y1 287 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 RRP8O43159 456 aaKnown RBP20.52■□□□□ 0.88
IRF3-228ENST00000601291 DENRO43583 198 aaKnown RBP20.52■□□□□ 0.88
IRF3-228ENST00000601291 SLC25A12O75746 678 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 IFI30P13284 250 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 FPR3P25089 353 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 PRKCDQ05655 676 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 TSPAN31Q12999 210 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 MED21Q13503 144 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 INPP5JQ15735 1006 aaPredicted RBP20.52■□□□□ 0.88
IRF3-228ENST00000601291 CMPK2Q5EBM0 449 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 SPINK14Q6IE38 97 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 KLHL17Q6TDP4 642 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 CD300LDQ6UXZ3 194 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 PFN4Q8NHR9 129 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 JSRP1Q96MG2 331 aaPredicted RBP20.52■□□□□ 0.88
IRF3-228ENST00000601291 MED17Q9NVC6 651 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 FAM118AQ9NWS6 357 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 OSGIN1Q9UJX0 560 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 HRH3Q9Y5N1 445 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 KCNMB2Q9Y691 235 aa20.52■□□□□ 0.88
IRF3-228ENST00000601291 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 B4DXG7 233 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 NEURL1O76050 574 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 PRKCAP17252 672 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 CNR1P21554 472 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 CTBP2P56545 445 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 ADARB1P78563 741 aaKnown RBP20.51■□□□□ 0.87
IRF3-228ENST00000601291 NPRL3Q12980 569 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 SPACA3Q8IXA5 215 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 ZNF524Q96C55 264 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 BPIFA2Q96DR5 249 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 TMEM43Q9BTV4 400 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 PLA2G3Q9NZ20 509 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 FBXL2Q9UKC9 423 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 VDAC3Q9Y277 283 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 SSUH2Q9Y2M2 353 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 HTR3EA5X5Y0 456 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 TRIM3O75382 744 aaPredicted RBP20.51■□□□□ 0.87
IRF3-228ENST00000601291 OSMP13725 252 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 EIF2S3P41091 472 aaKnown RBP20.51■□□□□ 0.87
IRF3-228ENST00000601291 GPR4P46093 362 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 GSSP48637 474 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 DNASE1L1P49184 302 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 DLX5P56178 289 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 ESRRGP62508 458 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 TIGD3Q6B0B8 471 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 ARSKQ6UWY0 536 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 FDCSPQ8NFU4 85 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 C1GALT1C1Q96EU7 318 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 MRGPRX4Q96LA9 322 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 SIGLEC12Q96PQ1 595 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 ANKRD60Q9BZ19 345 aa20.51■□□□□ 0.87
IRF3-228ENST00000601291 MEPEQ9NQ76 525 aaPredicted RBP20.51■□□□□ 0.87
IRF3-228ENST00000601291 A0A087WZY1 265 aa20.5■□□□□ 0.87
IRF3-228ENST00000601291 ETV2O00321 342 aaPredicted RBP20.5■□□□□ 0.87
IRF3-228ENST00000601291 APOBEC1P41238 236 aaKnown RBP20.5■□□□□ 0.87
IRF3-228ENST00000601291 ARG2P78540 354 aa20.5■□□□□ 0.87
IRF3-228ENST00000601291 CRYZQ08257 329 aaKnown RBP20.5■□□□□ 0.87
IRF3-228ENST00000601291 PLPPR5Q32ZL2 321 aa20.5■□□□□ 0.87
IRF3-228ENST00000601291 BROXQ5VW32 411 aa20.5■□□□□ 0.87
IRF3-228ENST00000601291 POMZP3Q6PJE2 187 aa20.5■□□□□ 0.87
IRF3-228ENST00000601291 DTNBP1Q96EV8 351 aa20.5■□□□□ 0.87
IRF3-228ENST00000601291 CNBD2Q96M20 576 aa20.5■□□□□ 0.87
IRF3-228ENST00000601291 GRIP2Q9C0E4 1043 aa20.5■□□□□ 0.87
IRF3-228ENST00000601291 C20orf141Q9NUB4 165 aa20.5■□□□□ 0.87
IRF3-228ENST00000601291 DOCK10Q96BY6 2186 aa20.5■□□□□ 0.87
IRF3-228ENST00000601291 HEATR5AQ86XA9 2040 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 TMED7-TICAM2A0A0A6YYA0 188 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 LOC100130705A0A1B0GUX0 176 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 SLC16A6O15403 523 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 KLF4O43474 513 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 CBR3O75828 277 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 IGF2P01344 180 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 FOXF1Q12946 379 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 SLC25A53Q5H9E4 307 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 TMPRSS11FQ6ZWK6 438 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 HAS2Q92819 552 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 ZBTB8AQ96BR9 441 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 GPA33Q99795 319 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 FAM173AQ9BQD7 235 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 REV1Q9UBZ9 1251 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 DKKL1Q9UK85 242 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 BOKQ9UMX3 212 aaPredicted RBP20.49■□□□□ 0.87
IRF3-228ENST00000601291 TMED7Q9Y3B3 224 aa20.49■□□□□ 0.87
IRF3-228ENST00000601291 IGKV1D-42A0A075B6H8 117 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms