RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	APOBEC1	P41238	236 aa	Known RBP	13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	CRISP3	P54108	245 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	SQLE	Q14534	574 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	RNPS1	Q15287	305 aa	Known RBP	13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	RGN	Q15493	299 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	AGK	Q53H12	422 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	SYT14P1	Q58G82	188 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	PAGE3	Q5JUK9	113 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	GTF2IRD2B	Q6EKJ0	949 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	GRINA	Q7Z429	371 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	GTF2IRD2	Q86UP8	949 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	CDC20B	Q86Y33	519 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	PEX5L	Q8IYB4	626 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	TMEM19	Q96HH6	336 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	REXO5	Q96IC2	774 aa	Known RBP	13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	ZNF385D	Q9H6B1	395 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	THUMPD1	Q9NXG2	353 aa	Known RBP	13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	SLAMF8	Q9P0V8	285 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	CHRNA9	Q9UGM1	479 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	NDRG3	Q9UGV2	375 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	ITGB1BP2	Q9UKP3	347 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	AKAP9	Q99996	3911 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	F8	P00451	2351 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	UQCRHL	A0A096LP55	91 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	TRBV5-3	A0A0A0MS03	114 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	C16orf97	H3BN30	126 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	FAAH	O00519	579 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	HRG	P04196	525 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	NUDT7	P0C024	238 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	ENPP1	P22413	925 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	KCNJ5	P48544	419 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	IDH2	P48735	452 aa	Known RBP	13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	FADD	Q13158	208 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	GNA13	Q14344	377 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	TESK1	Q15569	626 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	EXOC3L2	Q2M3D2	409 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	ZNF836	Q6ZNA1	936 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	VRK2	Q86Y07	508 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	SLC43A2	Q8N370	569 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	OR52P1P	Q8NH57	321 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	WFIKKN1	Q96NZ8	548 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	LIME1	Q9H400	295 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	RAD21L1	Q9H4I0	556 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	GP6	Q9HCN6	339 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	NPHS2	Q9NP85	383 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	A4GALT	Q9NPC4	353 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	KLHL28	Q9NXS3	571 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	KLHL13	Q9P2N7	655 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	DCTN4	Q9UJW0	460 aa		13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	ING1	Q9UK53	422 aa	Predicted RBP	13.8	□□□□□ -0.2
PLD3-223	ENST00000600948	IGHV3-15	A0A0B4J1V0	119 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	CDHR4	A6H8M9	788 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	SMAD9	O15198	467 aa	Known RBP	13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	PRKD3	O94806	890 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	KLK2	P20151	261 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	DIO1	P49895	249 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	EPS8	Q12929	822 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	LIN52	Q52LA3	116 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	TMPPE	Q6ZT21	453 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	NUFIP2	Q7Z417	695 aa	Known RBP	13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	ADGRG3	Q86Y34	549 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	TUSC5	Q8IXB3	177 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	ZNF440	Q8IYI8	595 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	PSD2	Q9BQI7	771 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	C12orf49	Q9H741	205 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	RLIM	Q9NVW2	624 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	VAPA	Q9P0L0	249 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	SPIN1	Q9Y657	262 aa	Predicted RBP	13.79	□□□□□ -0.2
PLD3-223	ENST00000600948	GMEB1	Q9Y692	573 aa		13.79	□□□□□ -0.2
PLD3-223	ENST00000600948		A0A0G2JPF8	293 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948		A0A1W2PP18	115 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948		A0A1W2PPR1	153 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	TMEM247	A6NEH6	219 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	CFAP73	A6NFT4	308 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	HNRNPCL2	B2RXH8	293 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	HNRNPCL3	B7ZW38	293 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	SULT2B1	O00204	365 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	CASK	O14936	926 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	CYTIP	O60759	359 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	HNRNPCL1	O60812	293 aa	Known RBP	13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	YES1	P07947	543 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	THBS1	P07996	1170 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	HNRNPCL4	P0DMR1	293 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	TFPI	P10646	304 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	NCF2	P19878	526 aa	Predicted RBP	13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	ACAA2	P42765	397 aa	Known RBP	13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	HTR3A	P46098	478 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	TMEM201	Q5SNT2	666 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	RNF220	Q5VTB9	566 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	PRAMEF8	Q5VWM4	474 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	PRAMEF7	Q5VXH5	474 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	FBXW10	Q5XX13	1052 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	TFAP2E	Q6VUC0	442 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	STAC2	Q6ZMT1	411 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	BEND4	Q6ZU67	534 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	C22orf34	Q6ZV56	151 aa		13.78	□□□□□ -0.2
PLD3-223	ENST00000600948	ZNF550	Q7Z398	422 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms