RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 REV1Q9UBZ9 1251 aa10.54□□□□□ -0.72
ZNF548-211ENST00000600927 B3GNT3Q9Y2A9 372 aa10.54□□□□□ -0.72
ZNF548-211ENST00000600927 TPRKBQ9Y3C4 175 aa10.54□□□□□ -0.72
ZNF548-211ENST00000600927 A0A0B4J2E0 115 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 SMIM31A0A1B0GVY4 71 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 A0A1B0GX12 115 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 SH3D21A4FU49 640 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 CPSF4LA6NMK7 179 aaKnown RBP10.53□□□□□ -0.72
ZNF548-211ENST00000600927 PYCARD-AS1I3L0S3 204 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 REM1O75628 298 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 SMNDC1O75940 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
ZNF548-211ENST00000600927 ZFAND5O76080 213 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 SEC24DO94855 1032 aaPredicted RBP10.53□□□□□ -0.72
ZNF548-211ENST00000600927 UTS2O95399 124 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 CLIC3O95833 236 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 CSTAP01040 98 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 TFAP2AP05549 437 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 SMIM18P0DKX4 95 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 ICAM2P13598 275 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 CHMP24386 653 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 FPR3P25089 353 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 IL12BP29460 328 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 SLC6A8P48029 635 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 MLLT10P55197 1068 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 SLC26A5P58743 744 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 IL1RL1Q01638 556 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 MAD2L1BPQ15013 274 aaPredicted RBP10.53□□□□□ -0.72
ZNF548-211ENST00000600927 PTGES3Q15185 160 aaKnown RBP10.53□□□□□ -0.72
ZNF548-211ENST00000600927 EXT1Q16394 746 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 SLC25A30Q5SVS4 291 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 SLX4IPQ5VYV7 408 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 RPL13AP3Q6NVV1 102 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 ULK3Q6PHR2 472 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 PAPD4Q6PIY7 484 aaKnown RBP10.53□□□□□ -0.72
ZNF548-211ENST00000600927 ISLR2Q6UXK2 745 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 LINC00114Q6XXX2 140 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 CDK20Q8IZL9 346 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 ZNF321PQ8N8H1 164 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 OR4C3Q8NH37 302 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 M1APQ8TC57 530 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 IPCEF1Q8WWN9 437 aaPredicted RBP10.53□□□□□ -0.72
ZNF548-211ENST00000600927 CNOT9Q92600 299 aaKnown RBP10.53□□□□□ -0.72
ZNF548-211ENST00000600927 PRSS27Q9BQR3 290 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 ZNF426Q9BUY5 554 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 SLC19A3Q9BZV2 496 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 LAT2Q9GZY6 243 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 MMP25Q9NPA2 562 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 PCDHGB6Q9Y5F9 930 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 PCDHGB5Q9Y5G0 923 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 PCDHGB1Q9Y5G3 927 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 NINQ8N4C6 2090 aa10.53□□□□□ -0.72
ZNF548-211ENST00000600927 CENPVL1A0A0U1RR11 272 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 DPPA5A6NC42 116 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 CLDN24A6NM45 220 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 KLF4O43474 513 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 LYPD3O95274 346 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 ANGPTL1O95841 491 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 THY1P04216 161 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 JUNBP17275 347 aaPredicted RBP10.52□□□□□ -0.73
ZNF548-211ENST00000600927 OMPP47874 163 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 GIPRP48546 466 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 TMED10P49755 219 aaKnown RBP10.52□□□□□ -0.73
ZNF548-211ENST00000600927 NR0B1P51843 470 aaKnown RBP10.52□□□□□ -0.73
ZNF548-211ENST00000600927 CTBP2P56545 445 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 COPZ1P61923 177 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 SNRPGP62308 76 aaKnown RBP10.52□□□□□ -0.73
ZNF548-211ENST00000600927 IL5RAQ01344 420 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 PRKCDQ05655 676 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 PLEKHN1Q494U1 663 aaPredicted RBP10.52□□□□□ -0.73
ZNF548-211ENST00000600927 PRR30Q53SZ7 412 aaPredicted RBP10.52□□□□□ -0.73
ZNF548-211ENST00000600927 TMPRSS11FQ6ZWK6 438 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 P3H2Q8IVL5 708 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 DND1Q8IYX4 353 aaKnown RBP10.52□□□□□ -0.73
ZNF548-211ENST00000600927 ARMC10Q8N2F6 343 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 ZADH2Q8N4Q0 377 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 ELP5Q8TE02 316 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 GTPBP3Q969Y2 492 aaKnown RBP10.52□□□□□ -0.73
ZNF548-211ENST00000600927 Q96MT0 163 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 TUBA1CQ9BQE3 449 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 TEX12Q9BXU0 123 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 MFRPQ9BY79 579 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 PRRG3Q9BZD7 231 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 DUSP21Q9H596 190 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 SLC25A19Q9HC21 320 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 IL20Q9NYY1 176 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 SELENONQ9NZV5 590 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 SLC7A7Q9UM01 511 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 NPFFR2Q9Y5X5 522 aa10.52□□□□□ -0.73
ZNF548-211ENST00000600927 PRRC2CQ9Y520 2896 aaKnown RBP10.51□□□□□ -0.73
ZNF548-211ENST00000600927 NPIPA5A0A0B4J1W7 369 aa10.51□□□□□ -0.73
ZNF548-211ENST00000600927 CLEC18AA5D8T8 446 aa10.51□□□□□ -0.73
ZNF548-211ENST00000600927 NPIPA7E9PJI5 369 aa10.51□□□□□ -0.73
ZNF548-211ENST00000600927 GTPBP1O00178 669 aaKnown RBP10.51□□□□□ -0.73
ZNF548-211ENST00000600927 SLC1A7O00341 560 aa10.51□□□□□ -0.73
ZNF548-211ENST00000600927 ZNF264O43296 627 aa10.51□□□□□ -0.73
ZNF548-211ENST00000600927 FRS3O43559 492 aa10.51□□□□□ -0.73
ZNF548-211ENST00000600927 PPM1BO75688 479 aa10.51□□□□□ -0.73
ZNF548-211ENST00000600927 OR6B1O95007 311 aa10.51□□□□□ -0.73
ZNF548-211ENST00000600927 TP53P04637 393 aaPredicted RBP10.51□□□□□ -0.73
ZNF548-211ENST00000600927 NPIPA8P0DM63 369 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms