RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 ATG4DQ86TL0 474 aaPredicted RBP18.52■□□□□ 0.55
PNKP-215ENST00000600910 GTPBP8Q8N3Z3 284 aaPredicted RBP18.52■□□□□ 0.55
PNKP-215ENST00000600910 OR2T29Q8NH02 315 aa18.52■□□□□ 0.55
PNKP-215ENST00000600910 NR4A3Q92570 626 aa18.52■□□□□ 0.55
PNKP-215ENST00000600910 UBL7Q96S82 380 aaPredicted RBP18.52■□□□□ 0.55
PNKP-215ENST00000600910 DEFB127Q9H1M4 99 aa18.52■□□□□ 0.55
PNKP-215ENST00000600910 TSPAN10Q9H1Z9 355 aaPredicted RBP18.52■□□□□ 0.55
PNKP-215ENST00000600910 NMNAT1Q9HAN9 279 aaPredicted RBP18.52■□□□□ 0.55
PNKP-215ENST00000600910 SELENONQ9NZV5 590 aa18.52■□□□□ 0.55
PNKP-215ENST00000600910 OSGIN1Q9UJX0 560 aa18.52■□□□□ 0.55
PNKP-215ENST00000600910 EPG5Q9HCE0 2579 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 C7orf72A4D263 438 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 CHP2O43745 196 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 LYPD3O95274 346 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 ADH6P28332 368 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 HTR3AP46098 478 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 POLR2HP52434 150 aaKnown RBP18.51■□□□□ 0.55
PNKP-215ENST00000600910 PIK3C3Q8NEB9 887 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 LRTOMTQ8WZ04 291 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 SLC38A4Q969I6 547 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 PIGQQ9BRB3 760 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 ACKR4Q9NPB9 350 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 MAN2C1Q9NTJ4 1040 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 CACNA1BQ00975 2339 aa18.51■□□□□ 0.55
PNKP-215ENST00000600910 OR2M5A3KFT3 312 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 ADAMDEC1O15204 470 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 CRYABP02511 175 aaKnown RBP18.5■□□□□ 0.55
PNKP-215ENST00000600910 H1F0P07305 194 aaKnown RBP18.5■□□□□ 0.55
PNKP-215ENST00000600910 FREM3P0C091 2139 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 THRBP10828 461 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 ZNF17P17021 662 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 FASP25445 335 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 APOBEC1P41238 236 aaKnown RBP18.5■□□□□ 0.55
PNKP-215ENST00000600910 B3GALT5-AS1P59052 145 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 CMPK2Q5EBM0 449 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 SWT1Q5T5J6 900 aaKnown RBP18.5■□□□□ 0.55
PNKP-215ENST00000600910 FAM180AQ6UWF9 173 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 OR52J3Q8NH60 311 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 DHRS1Q96LJ7 313 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 PRSS27Q9BQR3 290 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 SLC6A15Q9H2J7 730 aa18.5■□□□□ 0.55
PNKP-215ENST00000600910 TMED7-TICAM2A0A0A6YYA0 188 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 H0Y3Z8 333 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 GNGT2O14610 69 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 CLOCKO15516 846 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 GADD45GO95257 159 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 PNMTP11086 282 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 FCGR1AP12314 374 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 CXCR1P25024 350 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 WDR88Q6ZMY6 472 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 ADGRG3Q86Y34 549 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 NKAIN4Q8IVV8 208 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 SIAH3Q8IW03 269 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 CISD2Q8N5K1 135 aaKnown RBP18.49■□□□□ 0.55
PNKP-215ENST00000600910 SFXN2Q96NB2 322 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 C12orf10Q9HB07 376 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 AGPAT4Q9NRZ5 378 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 VNN3Q9NY84 501 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 DNAJB9Q9UBS3 223 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 TMED7Q9Y3B3 224 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 LIPGQ9Y5X9 500 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 ATRXP46100 2492 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 A0A087WUJ7 227 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 A0A1W2PRQ8 180 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 ELOA3DA6NLF2 546 aaPredicted RBP18.49■□□□□ 0.55
PNKP-215ENST00000600910 NPIPA5E9PKD4 350 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 EFNA2O43921 213 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 DEAF1O75398 565 aaPredicted RBP18.49■□□□□ 0.55
PNKP-215ENST00000600910 LDLRP01130 860 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 CCNA2P20248 432 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 IL11P20809 199 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 PPP1R8Q12972 351 aaKnown RBP18.49■□□□□ 0.55
PNKP-215ENST00000600910 DGCR6Q14129 220 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 TRAM2Q15035 370 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 ATP6AP1Q15904 470 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 ELOA3BQ3SY89 546 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 FGD3Q5JSP0 725 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 ELOA3Q8NG57 546 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 REEP1Q9H902 201 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 CHRNA9Q9UGM1 479 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 NPIPA1Q9UND3 350 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 SLC6A5Q9Y345 797 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 LYVE1Q9Y5Y7 322 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 U3KQV3 271 aa18.49■□□□□ 0.55
PNKP-215ENST00000600910 PRRC2CQ9Y520 2896 aaKnown RBP18.48■□□□□ 0.55
PNKP-215ENST00000600910 SUSD5O60279 629 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 WISP2O76076 250 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 PTNP21246 168 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 ELK4P28324 431 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 GFRA1P56159 465 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 SMIM11AP58511 58 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 RCN1Q15293 331 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 HMBOX1Q6NT76 420 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 LINC00114Q6XXX2 140 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 AMIGO2Q86SJ2 522 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 LILRA2Q8N149 483 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 TMEM255BQ8WV15 326 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 MPP4Q96JB8 637 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 PKP2Q99959 881 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 ANKRD19PQ9H560 264 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms