RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 KLF10Q13118 480 aa16.84■□□□□ 0.29
FARP1-229ENST00000600190 GPR68Q15743 365 aa16.84■□□□□ 0.29
FARP1-229ENST00000600190 OR4C3Q8NH37 302 aa16.84■□□□□ 0.29
FARP1-229ENST00000600190 PNPT1Q8TCS8 783 aaKnown RBP16.84■□□□□ 0.29
FARP1-229ENST00000600190 RAB8BQ92930 207 aa16.84■□□□□ 0.29
FARP1-229ENST00000600190 NPAS1Q99742 590 aa16.84■□□□□ 0.29
FARP1-229ENST00000600190 CXorf56Q9H5V9 222 aa16.84■□□□□ 0.29
FARP1-229ENST00000600190 ZNF385DQ9H6B1 395 aa16.84■□□□□ 0.29
FARP1-229ENST00000600190 TMEM185BQ9H7F4 350 aa16.84■□□□□ 0.29
FARP1-229ENST00000600190 PAQR5Q9NXK6 330 aaPredicted RBP16.84■□□□□ 0.29
FARP1-229ENST00000600190 ROS1P08922 2347 aa16.84■□□□□ 0.29
FARP1-229ENST00000600190 A0A087WZY1 265 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 BBIP1A8MTZ0 92 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 ALG1L2C9J202 215 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 TNFSF11O14788 317 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 SNX3O60493 162 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 OXSR1O95747 527 aaPredicted RBP16.83■□□□□ 0.28
FARP1-229ENST00000600190 NGFRP08138 427 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 IL11P20809 199 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 ATP12AP54707 1039 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 NR1H2P55055 460 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 DSTNP60981 165 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 FADDQ13158 208 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 NFYCQ13952 458 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 CYLC2Q14093 348 aaPredicted RBP16.83■□□□□ 0.28
FARP1-229ENST00000600190 CTU2Q2VPK5 515 aaKnown RBP16.83■□□□□ 0.28
FARP1-229ENST00000600190 EXOSC6Q5RKV6 272 aaKnown RBP16.83■□□□□ 0.28
FARP1-229ENST00000600190 LRIF1Q5T3J3 769 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 BEND4Q6ZU67 534 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.28
FARP1-229ENST00000600190 STK32CQ86UX6 486 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 GTPBP8Q8N3Z3 284 aaPredicted RBP16.83■□□□□ 0.28
FARP1-229ENST00000600190 ZNF614Q8N883 585 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 IGFBPL1Q8WX77 278 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 ROPN1LQ96C74 230 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 ADGRG7Q96K78 797 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 SH3GL1Q99961 368 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 ACTR6Q9GZN1 396 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 PAIP1Q9H074 479 aaKnown RBP16.83■□□□□ 0.28
FARP1-229ENST00000600190 C12orf49Q9H741 205 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 GID8Q9NWU2 228 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 P2RX2Q9UBL9 471 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 WDR45Q9Y484 360 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 KCNE3Q9Y6H6 103 aa16.83■□□□□ 0.28
FARP1-229ENST00000600190 LOC100653049A0A140TA62 436 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 A0A1W2PQD3 144 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 ADAMDEC1O15204 470 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 KRT34O76011 436 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 NPPAP01160 153 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 PAX1P15863 534 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 DRD4P21917 467 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 ZNF41P51814 821 aaPredicted RBP16.82■□□□□ 0.28
FARP1-229ENST00000600190 ATP5J2P56134 94 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 RAC1P63000 192 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 PAGE3Q5JUK9 113 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 HBMQ6B0K9 141 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 ESPNLQ6ZVH7 1005 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 DHDDSQ86SQ9 333 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 OR2V1Q8NHB1 315 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 RP9Q8TA86 221 aaKnown RBP16.82■□□□□ 0.28
FARP1-229ENST00000600190 PHOSPHO1Q8TCT1 267 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 PMM1Q92871 262 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 ZBTB8AQ96BR9 441 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 SH3YL1Q96HL8 342 aaPredicted RBP16.82■□□□□ 0.28
FARP1-229ENST00000600190 RNF145Q96MT1 663 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 THUMPD3Q9BV44 507 aaKnown RBP16.82■□□□□ 0.28
FARP1-229ENST00000600190 GLRX2Q9NS18 164 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 MED17Q9NVC6 651 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 CSPG4Q6UVK1 2322 aa16.82■□□□□ 0.28
FARP1-229ENST00000600190 FBN1P35555 2871 aaKnown RBP16.81■□□□□ 0.28
FARP1-229ENST00000600190 A0A0J9YW62 118 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 C5orf58C9J3I9 102 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 HMGN4O00479 90 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 HS3ST1O14792 307 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 GUSBP08236 651 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 ME2P23368 584 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 CRISP3P54108 245 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 RGNQ15493 299 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 PLPPR5Q32ZL2 321 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.81■□□□□ 0.28
FARP1-229ENST00000600190 PDSS1Q5T2R2 415 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 GTF2IRD2BQ6EKJ0 949 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 HEPHL1Q6MZM0 1159 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 MTDHQ86UE4 582 aaKnown RBP16.81■□□□□ 0.28
FARP1-229ENST00000600190 GTF2IRD2Q86UP8 949 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 DPP10Q8N608 796 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 ZNF611Q8N823 705 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 OIT3Q8WWZ8 545 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 AKAP1Q92667 903 aaKnown RBP eCLIP16.81■□□□□ 0.28
FARP1-229ENST00000600190 TRNT1Q96Q11 434 aaKnown RBP16.81■□□□□ 0.28
FARP1-229ENST00000600190 MTHFD2LQ9H903 347 aaPredicted RBP16.81■□□□□ 0.28
FARP1-229ENST00000600190 ZNF701Q9NV72 531 aaPredicted RBP16.81■□□□□ 0.28
FARP1-229ENST00000600190 FBXO34Q9NWN3 711 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 ADAM21Q9UKJ8 722 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 MKLN1Q9UL63 735 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 LAMP3Q9UQV4 416 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 GPR52Q9Y2T5 361 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 ARL2BPQ9Y2Y0 163 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 DTNAQ9Y4J8 743 aa16.81■□□□□ 0.28
FARP1-229ENST00000600190 FBN3Q75N90 2809 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms