RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 SERPINA11Q86U17 422 aa13.64□□□□□ -0.23
LIG1-219ENST00000600055 ADGRG3Q86Y34 549 aa13.64□□□□□ -0.23
LIG1-219ENST00000600055 C11orf65Q8NCR3 313 aa13.64□□□□□ -0.23
LIG1-219ENST00000600055 HIPK4Q8NE63 616 aa13.64□□□□□ -0.23
LIG1-219ENST00000600055 RP9Q8TA86 221 aaKnown RBP13.64□□□□□ -0.23
LIG1-219ENST00000600055 DNAJA3Q96EY1 480 aa13.64□□□□□ -0.23
LIG1-219ENST00000600055 USP22Q9UPT9 525 aa13.64□□□□□ -0.23
LIG1-219ENST00000600055 ANGPT4Q9Y264 503 aa13.64□□□□□ -0.23
LIG1-219ENST00000600055 HEATR5AQ86XA9 2040 aa13.64□□□□□ -0.23
LIG1-219ENST00000600055 SPTAN1Q13813 2472 aaKnown RBP13.63□□□□□ -0.23
LIG1-219ENST00000600055 A0A1W2PNV4 684 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 GJE1A6NN92 205 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 OPRM1P35372 400 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 APOBEC1P41238 236 aaKnown RBP13.63□□□□□ -0.23
LIG1-219ENST00000600055 RBBP4Q09028 425 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 PDSS1Q5T2R2 415 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 C3orf33Q6P1S2 294 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 GRINAQ7Z429 371 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 KRT73Q86Y46 540 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 ZNF440Q8IYI8 595 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 PCYOX1LQ8NBM8 494 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 OR8J3Q8NGG0 315 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 ROBO4Q8WZ75 1007 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 ZFP3Q96NJ6 502 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 OR5B2Q96R09 309 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 SFXN3Q9BWM7 321 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 PRRG4Q9BZD6 226 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 RNF122Q9H9V4 155 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 SERINC1Q9NRX5 453 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 GID8Q9NWU2 228 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 CHRNA9Q9UGM1 479 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 OSGIN1Q9UJX0 560 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 MCTS1Q9ULC4 181 aaKnown RBP13.63□□□□□ -0.23
LIG1-219ENST00000600055 CLEC4AQ9UMR7 237 aa13.63□□□□□ -0.23
LIG1-219ENST00000600055 TMED7-TICAM2A0A0A6YYA0 188 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 TMEM72A0PK05 275 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 EEF1E1-BLOC1S5C9J1V9 151 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 FAAHO00519 579 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 AIM2O14862 343 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 EEF1E1O43324 174 aaKnown RBP13.62□□□□□ -0.23
LIG1-219ENST00000600055 TNFSF13O75888 250 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 SYNGR4O95473 234 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 IL18BPO95998 194 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 NPPAP01160 153 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 OPN1SWP03999 348 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 TACR3P29371 465 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 SLC7A1P30825 629 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 PRKAR1BP31321 381 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 SLC1A3P43003 542 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 KIR2DL2P43627 348 aaPredicted RBP13.62□□□□□ -0.23
LIG1-219ENST00000600055 PCBP3P57721 371 aaKnown RBP13.62□□□□□ -0.23
LIG1-219ENST00000600055 SIRPAP78324 504 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 DMTNQ08495 405 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 SNTB1Q13884 538 aaKnown RBP13.62□□□□□ -0.23
LIG1-219ENST00000600055 VWA1Q6PCB0 445 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 DHRS4L2Q6PKH6 230 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 ZNF550Q7Z398 422 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 PIGWQ7Z7B1 504 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 CALHM3Q86XJ0 350 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 CADM2Q8N3J6 435 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 CNEP1R1Q8N9A8 125 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 ZNF607Q96SK3 696 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 ECSITQ9BQ95 431 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 WFDC6Q9BQY6 131 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 SPATA5L1Q9BVQ7 753 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 OR11A1Q9GZK7 315 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 ARMC7Q9H6L4 198 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 PAQR5Q9NXK6 330 aaPredicted RBP13.62□□□□□ -0.23
LIG1-219ENST00000600055 TMED7Q9Y3B3 224 aa13.62□□□□□ -0.23
LIG1-219ENST00000600055 FLNBO75369 2602 aaKnown RBP13.61□□□□□ -0.23
LIG1-219ENST00000600055 SPTBN1Q01082 2364 aaKnown RBP13.61□□□□□ -0.23
LIG1-219ENST00000600055 IGHV3-15A0A0B4J1V0 119 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 M0QX08 132 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 MFN2O95140 757 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 TFPIP10646 304 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 COX6B1P14854 86 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 UQCRBP14927 111 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 IGFBP2P18065 325 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 KLK2P20151 261 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 PCGF2P35227 344 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 ASCL1P50553 236 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 POLR2HP52434 150 aaKnown RBP13.61□□□□□ -0.23
LIG1-219ENST00000600055 GUSBP1Q15486 140 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 ZNF239Q16600 458 aaKnown RBP13.61□□□□□ -0.23
LIG1-219ENST00000600055 ZSWIM7Q19AV6 140 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 SYT14P1Q58G82 188 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 OR2A2Q6IF42 318 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 MEX3BQ6ZN04 569 aaKnown RBP13.61□□□□□ -0.23
LIG1-219ENST00000600055 BTLAQ7Z6A9 289 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 LUZP2Q86TE4 346 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 ARMC8Q8IUR7 673 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 SMYD1Q8NB12 490 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 ACBD4Q8NC06 268 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 MARVELD3Q96A59 401 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 STARD4Q96DR4 205 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 ARL5BQ96KC2 179 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 ZNF583Q96ND8 569 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 SH3GL1Q99961 368 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 PRR14Q9BWN1 585 aa13.61□□□□□ -0.23
LIG1-219ENST00000600055 ADAM19Q9H013 955 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms