RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 BHLHA15Q7RTS1 189 aaPredicted RBP12.99□□□□□ -0.33
IRF3-223ENST00000599223 RIMKLAQ8IXN7 391 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 CLECL1Q8IZS7 167 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 PIWIL2Q8TC59 973 aaKnown RBP12.99□□□□□ -0.33
IRF3-223ENST00000599223 ADAMTS15Q8TE58 950 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 SMAP2Q8WU79 429 aaPredicted RBP12.99□□□□□ -0.33
IRF3-223ENST00000599223 ZNF775Q96BV0 537 aaPredicted RBP12.99□□□□□ -0.33
IRF3-223ENST00000599223 COQ8BQ96D53 544 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 PPP3R2Q96LZ3 170 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 HDHD5Q9BXW7 423 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 SLCO5A1Q9H2Y9 848 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 ESRP2Q9H6T0 727 aaKnown RBP12.99□□□□□ -0.33
IRF3-223ENST00000599223 TIGARQ9NQ88 270 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 THAP1Q9NVV9 213 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 KLHL14Q9P2G3 628 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 GDF2Q9UK05 429 aaPredicted RBP12.99□□□□□ -0.33
IRF3-223ENST00000599223 FAF1Q9UNN5 650 aaPredicted RBP12.99□□□□□ -0.33
IRF3-223ENST00000599223 ERICH4A6NGS2 130 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 SHISA9B4DS77 424 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 H3BNH8 94 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 ZNF264O43296 627 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 CD8AP01732 235 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 COX5AP20674 150 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 PTNP21246 168 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 IGHV1-2P23083 117 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 SLC7A1P30825 629 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 SOAT1P35610 550 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 PLAURQ03405 335 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 ITGADQ13349 1161 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 P2RY6Q15077 328 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 STK11Q15831 433 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 ATP6AP1LQ52LC2 224 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 IL23RQ5VWK5 629 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 Q6ZT83 130 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 KIRREL3Q8IZU9 778 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 OR5W2Q8NH69 310 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 HSD17B8Q92506 261 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 C7orf26Q96N11 449 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 SDF2Q99470 211 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 REG4Q9BYZ8 158 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 HOXD1Q9GZZ0 328 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 KLHL9Q9P2J3 617 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 ZDHHC2Q9UIJ5 367 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 ARL2BPQ9Y2Y0 163 aa12.98□□□□□ -0.33
IRF3-223ENST00000599223 A0A1W2PP18 115 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 SERINC4A6NH21 518 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 GTPBP1O00178 669 aaKnown RBP12.97□□□□□ -0.33
IRF3-223ENST00000599223 SNX3O60493 162 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 FCMRO60667 390 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 CYTIPO60759 359 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 DNAJA2O60884 412 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 ADAM11O75078 769 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 TGDSO95455 350 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 FESP07332 822 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 G6PDP11413 515 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 MAPK1P28482 360 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 SERPINB5P36952 375 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 RPL3P39023 403 aaKnown RBP12.97□□□□□ -0.33
IRF3-223ENST00000599223 SLC1A6P48664 564 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 CASP9P55211 416 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 RAC3P60763 192 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 SPOCK1Q08629 439 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 BST1Q10588 318 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 TIGD2Q4W5G0 525 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 ABLIM2Q6H8Q1 611 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 C3orf33Q6P1S2 294 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 PIGWQ7Z7B1 504 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 SLC43A2Q8N370 569 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 FNDC5Q8NAU1 212 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 GTPBP3Q969Y2 492 aaKnown RBP12.97□□□□□ -0.33
IRF3-223ENST00000599223 DNAJA3Q96EY1 480 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 OR5B2Q96R09 309 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 SIKE1Q9BRV8 207 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 TRAF4Q9BUZ4 470 aaPredicted RBP12.97□□□□□ -0.33
IRF3-223ENST00000599223 THUMPD3Q9BV44 507 aaKnown RBP12.97□□□□□ -0.33
IRF3-223ENST00000599223 NMUR2Q9GZQ4 415 aa12.97□□□□□ -0.33
IRF3-223ENST00000599223 YLPM1P49750 1951 aaKnown RBP12.97□□□□□ -0.33
IRF3-223ENST00000599223 RNF103-CHMP3A0A140T963 221 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 CFLARO15519 480 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 LYPLA1O75608 230 aaPredicted RBP12.96□□□□□ -0.33
IRF3-223ENST00000599223 UGT2B17O75795 530 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 IGHV3-9P01782 118 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 C1QCP02747 245 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 KRT16P08779 473 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 DDX5P17844 614 aaKnown RBP12.96□□□□□ -0.33
IRF3-223ENST00000599223 DIO1P49895 249 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 CDH11P55287 796 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 SESN3P58005 492 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 C21orf58P58505 322 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 ABCE1P61221 599 aaKnown RBP12.96□□□□□ -0.33
IRF3-223ENST00000599223 RASGEF1BQ0VAM2 473 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 FUT5Q11128 374 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 CBFBQ13951 182 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 PPA1Q15181 289 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 GPR68Q15743 365 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 ZNF141Q15928 474 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 ETFDHQ16134 617 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 MAPK14Q16539 360 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 HEPHL1Q6MZM0 1159 aa12.96□□□□□ -0.33
IRF3-223ENST00000599223 HMGN2P46Q86SG4 172 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms