RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 C10orf82Q8WW14 230 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 CPNE4Q96A23 557 aaPredicted RBP14.98□□□□□ -0.01
SSBP4-204ENST00000597724 C14orf79Q96F83 325 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 SPATA9Q9BWV2 254 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 COQ10BQ9H8M1 238 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 SLC24A3Q9HC58 644 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 TIGARQ9NQ88 270 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 CTPS2Q9NRF8 586 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 PRDM4Q9UKN5 801 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 CHST2Q9Y4C5 530 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 CFAP73A6NFT4 308 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 PABPC4LP0CB38 370 aaKnown RBP14.97□□□□□ -0.01
SSBP4-204ENST00000597724 ETS2P15036 469 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 SLC7A1P30825 629 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 ACAA2P42765 397 aaKnown RBP14.97□□□□□ -0.01
SSBP4-204ENST00000597724 SIRPAP78324 504 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 CDK6Q00534 326 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 SNTB1Q13884 538 aaKnown RBP14.97□□□□□ -0.01
SSBP4-204ENST00000597724 NFYCQ13952 458 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 ZNF239Q16600 458 aaKnown RBP14.97□□□□□ -0.01
SSBP4-204ENST00000597724 ZNF311Q5JNZ3 666 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 REEP3Q6NUK4 255 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 FAM214BQ7L5A3 538 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 GRINAQ7Z429 371 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 BTLAQ7Z6A9 289 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 ADGRG3Q86Y34 549 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 NFKBIDQ8NI38 313 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 ROBO4Q8WZ75 1007 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 GMPPAQ96IJ6 420 aaPredicted RBP14.97□□□□□ -0.01
SSBP4-204ENST00000597724 RBM24Q9BX46 236 aaKnown RBP14.97□□□□□ -0.01
SSBP4-204ENST00000597724 SRXN1Q9BYN0 137 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 KCNN3Q9UGI6 736 aa14.97□□□□□ -0.01
SSBP4-204ENST00000597724 A0A1W2PNR3 127 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 MSTNO14793 375 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 CGAP01215 116 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 GKN3PP0CG01 181 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 UQCRBP14927 111 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 ADSLP30566 484 aaPredicted RBP14.96□□□□□ -0.01
SSBP4-204ENST00000597724 SSTR2P30874 369 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 PEX19P40855 299 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 SLC1A3P43003 542 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 HTR3AP46098 478 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 RAC3P60763 192 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 SELPLGQ14242 412 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 KIF18BQ86Y91 864 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 SLC25A43Q8WUT9 341 aaPredicted RBP14.96□□□□□ -0.01
SSBP4-204ENST00000597724 OR5B2Q96R09 309 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 RSPO3Q9BXY4 272 aaPredicted RBP14.96□□□□□ -0.01
SSBP4-204ENST00000597724 ARMC7Q9H6L4 198 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 CACYBPQ9HB71 228 aaKnown RBP14.96□□□□□ -0.01
SSBP4-204ENST00000597724 GLRX2Q9NS18 164 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 CHRNA9Q9UGM1 479 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 CLEC4AQ9UMR7 237 aa14.96□□□□□ -0.01
SSBP4-204ENST00000597724 SPIN1Q9Y657 262 aaPredicted RBP14.96□□□□□ -0.01
SSBP4-204ENST00000597724 PDZD2O15018 2839 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 SS18L1O75177 396 aaPredicted RBP14.95□□□□□ -0.02
SSBP4-204ENST00000597724 SMNDC1O75940 238 aaKnown RBP eCLIP14.95□□□□□ -0.025e-7■■■■■ 29.1
SSBP4-204ENST00000597724 PLGP00747 810 aaPredicted RBP14.95□□□□□ -0.02
SSBP4-204ENST00000597724 CD8BP10966 210 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 PRG2P13727 222 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 SLC6A2P23975 617 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 FKBP2P26885 142 aaKnown RBP14.95□□□□□ -0.02
SSBP4-204ENST00000597724 CPA2P48052 419 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 MTPNP58546 118 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 SORDQ00796 357 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 RBBP4Q09028 425 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 SCARB2Q14108 478 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 CAPRIN1Q14444 709 aaKnown RBP14.95□□□□□ -0.02
SSBP4-204ENST00000597724 MAPRE2Q15555 327 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 TRMT5Q32P41 509 aaKnown RBP14.95□□□□□ -0.02
SSBP4-204ENST00000597724 SYT14P1Q58G82 188 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 COQ5Q5HYK3 327 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 GTF2IRD2BQ6EKJ0 949 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 ZNF550Q7Z398 422 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 GTF2IRD2Q86UP8 949 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 KRT73Q86Y46 540 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 PTOV1Q86YD1 416 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 RNF128Q8TEB7 428 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 SLC35B4Q969S0 331 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 REXO5Q96IC2 774 aaKnown RBP14.95□□□□□ -0.02
SSBP4-204ENST00000597724 ADAM19Q9H013 955 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 KAT8Q9H7Z6 458 aaKnown RBP14.95□□□□□ -0.02
SSBP4-204ENST00000597724 GALNT8Q9NY28 637 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 OSGIN1Q9UJX0 560 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 EMC9Q9Y3B6 208 aa14.95□□□□□ -0.02
SSBP4-204ENST00000597724 TMED7-TICAM2A0A0A6YYA0 188 aa14.94□□□□□ -0.02
SSBP4-204ENST00000597724 LOC100653049A0A140TA62 436 aa14.94□□□□□ -0.02
SSBP4-204ENST00000597724 SLC22A2O15244 555 aa14.94□□□□□ -0.02
SSBP4-204ENST00000597724 KRT34O76011 436 aa14.94□□□□□ -0.02
SSBP4-204ENST00000597724 NPPAP01160 153 aa14.94□□□□□ -0.02
SSBP4-204ENST00000597724 TACR3P29371 465 aa14.94□□□□□ -0.02
SSBP4-204ENST00000597724 KIR2DL3P43628 341 aa14.94□□□□□ -0.02
SSBP4-204ENST00000597724 CLK1P49759 484 aaKnown RBP14.94□□□□□ -0.02
SSBP4-204ENST00000597724 POLR2HP52434 150 aaKnown RBP14.94□□□□□ -0.02
SSBP4-204ENST00000597724 SEC24CP53992 1094 aa14.94□□□□□ -0.02
SSBP4-204ENST00000597724 CTBP2P56545 445 aa14.94□□□□□ -0.02
SSBP4-204ENST00000597724 TLE4Q04727 773 aa14.94□□□□□ -0.02
SSBP4-204ENST00000597724 MYBPHQ13203 477 aa14.94□□□□□ -0.02
SSBP4-204ENST00000597724 CYLC2Q14093 348 aaPredicted RBP14.94□□□□□ -0.02
SSBP4-204ENST00000597724 NANOGP8Q6NSW7 305 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms