RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ZNF563Q8TA94 476 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 FAR1Q8WVX9 515 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 TMEM41AQ96HV5 264 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 C7orf34Q96L11 122 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 PRRC1Q96M27 445 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 ZNF300Q96RE9 604 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 MCHR1Q99705 422 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 PIP5K1AQ99755 562 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 FAM173AQ9BQD7 235 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 AMBRA1Q9C0C7 1298 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 POLR2J2Q9GZM3 115 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 POLR2J3Q9H1A7 115 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 PTGES2Q9H7Z7 377 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 DCLRE1BQ9H816 532 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 TMEM27Q9HBJ8 222 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 KLHL1Q9NR64 748 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 SELENONQ9NZV5 590 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 NDUFAF4Q9P032 175 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 BOKQ9UMX3 212 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 ABCA4P78363 2273 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 CACNA1CQ13936 2221 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 IGLV3-32A0A0A0MS00 114 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 CPSF4LA6NMK7 179 aaKnown RBP10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 H3BNX3 289 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 KLRC4-KLRK1H3BQV0 150 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 GNB5O14775 395 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 SNPHO15079 494 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 OIP5O43482 229 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 NME2P1O60361 137 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 SP1P08047 785 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 PRG2P13727 222 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 RHCEP18577 417 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 CNR1P21554 472 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 NME2P22392 152 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 DNASE1L1P49184 302 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 ZNF41P51814 821 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 ZNF136P52737 540 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 SMIM11AP58511 58 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 GPR85P60893 370 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 HOXC5Q00444 222 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 PLAURQ03405 335 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 RIPK1Q13546 671 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 NPTX1Q15818 432 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 ZNF766Q5HY98 468 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 ENTPD8Q5MY95 495 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 OR2T5Q6IEZ7 315 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 SLC25A25Q6KCM7 469 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 CBLN3Q6UW01 205 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 PIWIL3Q7Z3Z3 882 aaKnown RBP10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 ZNF227Q86WZ6 799 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 RBM45Q8IUH3 476 aaKnown RBP10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 CADM2Q8N3J6 435 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 ACBD4Q8NC06 268 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 FAM98AQ8NCA5 519 aaKnown RBP10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 OR4D11Q8NGI4 311 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 OR1J4Q8NGS1 313 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 OR2T29Q8NH02 315 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 OR5W2Q8NH69 310 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 SLX1AQ9BQ83 275 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 FNDC11Q9BVV2 318 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 RSPO3Q9BXY4 272 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 RTN4RQ9BZR6 473 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 TRIM2Q9C040 744 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 REEP1Q9H902 201 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 DNAJB9Q9UBS3 223 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 B4GALT7Q9UBV7 327 aa10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 NCOA6Q14686 2063 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-213ENST00000597325 TRAV17A0A0B4J275 112 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 A0A0G2JMM0 328 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 A0A1W2PPB8 328 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 A0A1W2PRS3 328 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 C17orf51A8MQB3 221 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 KIR3DP1A8MWS1 328 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 FAAHO00519 579 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 CLOCKO15516 846 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 MGRN1O60291 552 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 CDC40O60508 579 aaKnown RBP eCLIP10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 E2F6O75461 281 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 DIRAS1O95057 198 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 OR5F1O95221 314 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 ATP6V1G2O95670 118 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 HTR2AP28223 471 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 YAP1P46937 504 aaKnown RBP10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 TNFSF10P50591 281 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 GANABQ14697 944 aaKnown RBP10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 ATP6AP1Q15904 470 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 WBP2NLQ6ICG8 309 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 OR5M10Q6IEU7 315 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 ZNF613Q6PF04 617 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 PLCZ1Q86YW0 608 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 OFCC1Q8IZS5 231 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 PQLC1Q8N2U9 271 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 OR2M7Q8NG81 312 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 OR2M3Q8NG83 312 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 RNF217Q8TC41 542 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 TMEM234Q8WY98 164 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 LRTOMTQ8WZ04 291 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 FRMD6Q96NE9 622 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 WFDC6Q9BQY6 131 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 BDH2Q9BUT1 245 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms