RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 KIF18BQ86Y91 864 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 BBS10Q8TAM1 723 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 ZNF317Q96PQ6 595 aaPredicted RBP18.86■□□□□ 0.61
PNKP-209ENST00000596726 MCCC2Q9HCC0 563 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 TIGARQ9NQ88 270 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 CTPS2Q9NRF8 586 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 GLRX2Q9NS18 164 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 RLIMQ9NVW2 624 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 GALNT8Q9NY28 637 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 PRDM4Q9UKN5 801 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 CORO2BQ9UQ03 480 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 CHST2Q9Y4C5 530 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 A0A1W2PNR3 127 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 EVPLLA8MZ36 301 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 ANGPT2O15123 496 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 KIR2DL3P43628 341 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 RAC3P60763 192 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 PPP4R4Q6NUP7 873 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 DHDDSQ86SQ9 333 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 ADGRG3Q86Y34 549 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 ZNF440Q8IYI8 595 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 RNF128Q8TEB7 428 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 SLC25A43Q8WUT9 341 aaPredicted RBP18.85■□□□□ 0.61
PNKP-209ENST00000596726 ROBO4Q8WZ75 1007 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 ANKRD27Q96NW4 1050 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 ZNF559Q9BR84 538 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 TMEM38AQ9H6F2 299 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 MRGBPQ9NV56 204 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 KLHL14Q9P2G3 628 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.85■□□□□ 0.61
PNKP-209ENST00000596726 ZNF232Q9UNY5 417 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 IFT52Q9Y366 437 aa18.85■□□□□ 0.61
PNKP-209ENST00000596726 CFAP73A6NFT4 308 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 SMNDC1O75940 238 aaKnown RBP eCLIP18.84■□□□□ 0.61
PNKP-209ENST00000596726 ETS2P15036 469 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 SLC7A1P30825 629 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 ACAA2P42765 397 aaKnown RBP18.84■□□□□ 0.61
PNKP-209ENST00000596726 CPA2P48052 419 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 KRTAP10-9P60411 292 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 SF3A3Q12874 501 aaKnown RBP eCLIP18.84■□□□□ 0.61
PNKP-209ENST00000596726 MYBPHQ13203 477 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 LARS2Q15031 903 aaKnown RBP18.84■□□□□ 0.61
PNKP-209ENST00000596726 ADRM1Q16186 407 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 GTF2IRD2BQ6EKJ0 949 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 ZNF474Q6S9Z5 364 aaPredicted RBP18.84■□□□□ 0.61
PNKP-209ENST00000596726 GTF2IRD2Q86UP8 949 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 CLIP4Q8N3C7 705 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 NFKBIDQ8NI38 313 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 CGREF1Q99674 301 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 SPATA9Q9BWV2 254 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 RSPO3Q9BXY4 272 aaPredicted RBP18.84■□□□□ 0.61
PNKP-209ENST00000596726 OPN3Q9H1Y3 402 aaPredicted RBP18.84■□□□□ 0.61
PNKP-209ENST00000596726 SAR1AQ9NR31 198 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 PLSCR4Q9NRQ2 329 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 CRIM1Q9NZV1 1036 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 CHRNA9Q9UGM1 479 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 CLEC4AQ9UMR7 237 aa18.84■□□□□ 0.61
PNKP-209ENST00000596726 FBP2O00757 339 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 PABPC4LP0CB38 370 aaKnown RBP18.83■□□□□ 0.6
PNKP-209ENST00000596726 GKN3PP0CG01 181 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 FKBP2P26885 142 aaKnown RBP18.83■□□□□ 0.6
PNKP-209ENST00000596726 SLC1A3P43003 542 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 HTR3AP46098 478 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 CDK6Q00534 326 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 KLF10Q13118 480 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 SYT14P1Q58G82 188 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 REEP3Q6NUK4 255 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 ZZZ3Q8IYH5 903 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 ZNF610Q8N9Z0 462 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 OR6K3Q8NGY3 331 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 FAM222BQ8WU58 562 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 LURAP1Q96LR2 239 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 OR5B2Q96R09 309 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 ADAM19Q9H013 955 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 OSGIN1Q9UJX0 560 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 EMC9Q9Y3B6 208 aa18.83■□□□□ 0.6
PNKP-209ENST00000596726 SPIN1Q9Y657 262 aaPredicted RBP18.83■□□□□ 0.6
PNKP-209ENST00000596726 C5orf58C9J3I9 102 aa18.82■□□□□ 0.6
PNKP-209ENST00000596726 PLGP00747 810 aaPredicted RBP18.82■□□□□ 0.6
PNKP-209ENST00000596726 CLK1P49759 484 aaKnown RBP18.82■□□□□ 0.6
PNKP-209ENST00000596726 RNPS1Q15287 305 aaKnown RBP18.82■□□□□ 0.6
PNKP-209ENST00000596726 ZNF311Q5JNZ3 666 aa18.82■□□□□ 0.6
PNKP-209ENST00000596726 TMPPEQ6ZT21 453 aa18.82■□□□□ 0.6
PNKP-209ENST00000596726 FCRLAQ7L513 359 aa18.82■□□□□ 0.6
PNKP-209ENST00000596726 ZNF550Q7Z398 422 aa18.82■□□□□ 0.6
PNKP-209ENST00000596726 C10orf82Q8WW14 230 aa18.82■□□□□ 0.6
PNKP-209ENST00000596726 REXO5Q96IC2 774 aaKnown RBP18.82■□□□□ 0.6
PNKP-209ENST00000596726 GP6Q9HCN6 339 aa18.82■□□□□ 0.6
PNKP-209ENST00000596726 PROCRQ9UNN8 238 aa18.82■□□□□ 0.6
PNKP-209ENST00000596726 FREM1Q5H8C1 2179 aa18.82■□□□□ 0.6
PNKP-209ENST00000596726 TMED7-TICAM2A0A0A6YYA0 188 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 FAM221AA4D161 298 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 TUBAL3A6NHL2 446 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 UQCRBP14927 111 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 ENPP1P22413 925 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 AGTR1P30556 359 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 ADSLP30566 484 aaPredicted RBP18.81■□□□□ 0.6
PNKP-209ENST00000596726 DIO1P49895 249 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 POLR2HP52434 150 aaKnown RBP18.81■□□□□ 0.6
PNKP-209ENST00000596726 CTBP2P56545 445 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms