RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 CCR4P51679 360 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 LSM11P83369 360 aaKnown RBP eCLIP8.75□□□□□ -1.01
LIG1-209ENST00000596104 CHRNEQ04844 493 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 TP53BP2Q13625 1128 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 ZNF141Q15928 474 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 GABRA6Q16445 453 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 UGT3A2Q3SY77 523 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 CCDC153Q494R4 210 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 GALNTL6Q49A17 601 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 SYT14P1Q58G82 188 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 PDZK1Q5T2W1 519 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 KANK2Q63ZY3 851 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 KLHL17Q6TDP4 642 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 MTDHQ86UE4 582 aaKnown RBP8.75□□□□□ -1.01
LIG1-209ENST00000596104 CNPY4Q8N129 248 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 TMCO5AQ8N6Q1 288 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 WDR31Q8NA23 367 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 ST8SIA1Q92185 356 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 APH1AQ96BI3 265 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 ARL8AQ96BM9 186 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 OR7D2Q96RA2 312 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 SDF2Q99470 211 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 THUMPD3Q9BV44 507 aaKnown RBP8.75□□□□□ -1.01
LIG1-209ENST00000596104 GATA5Q9BWX5 397 aaPredicted RBP8.75□□□□□ -1.01
LIG1-209ENST00000596104 NMUR2Q9GZQ4 415 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 LAT2Q9GZY6 243 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 SERHL2Q9H4I8 314 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 ACER3Q9NUN7 267 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 EMC3Q9P0I2 261 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 NOSIPQ9Y314 301 aaKnown RBP8.75□□□□□ -1.01
LIG1-209ENST00000596104 FIS1Q9Y3D6 152 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 ANK2Q01484 3957 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 CCT8L1PA6NM43 557 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 TMEM233B4DJY2 109 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 M0R1B8 84 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 SULT2B1O00204 365 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 FAM153BP0C7A2 387 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 DDX5P17844 614 aaKnown RBP8.74□□□□□ -1.01
LIG1-209ENST00000596104 CRHR1P34998 444 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 RPL3P39023 403 aaKnown RBP8.74□□□□□ -1.01
LIG1-209ENST00000596104 SLC16A1P53985 500 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 CSNK2A1P68400 391 aaPredicted RBP8.74□□□□□ -1.01
LIG1-209ENST00000596104 SLC25A3Q00325 362 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 MERTKQ12866 999 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 MST1LQ2TV78 715 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 FAM153CQ494X1 144 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 IL17RELQ6ZVW7 336 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 UBE2J2Q8N2K1 259 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 OR5D16Q8NGK9 328 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 SFXN5Q8TD22 340 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 SLC25A43Q8WUT9 341 aaPredicted RBP8.74□□□□□ -1.01
LIG1-209ENST00000596104 TWIST2Q8WVJ9 160 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 TMEM234Q8WY98 164 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 COQ8BQ96D53 544 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 MSI2Q96DH6 328 aaKnown RBP8.74□□□□□ -1.01
LIG1-209ENST00000596104 ARL5BQ96KC2 179 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 TRMOQ9BU70 441 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 CCDC106Q9BWC9 280 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 PRR14Q9BWN1 585 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 C1QTNF6Q9BXI9 259 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 SERINC1Q9NRX5 453 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 ASB6Q9NWX5 421 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 GIMAP2Q9UG22 337 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 KCNS2Q9ULS6 477 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 TRAF6Q9Y4K3 522 aa8.74□□□□□ -1.01
LIG1-209ENST00000596104 IGHV4-61A0A0C4DH41 118 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 TMEM114B3SHH9 223 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 HAX1O00165 279 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 GPR171O14626 319 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 PIP5K1BO14986 540 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 DNPH1O43598 174 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 FCMRO60667 390 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 BCAS1O75363 584 aaPredicted RBP8.73□□□□□ -1.01
LIG1-209ENST00000596104 UGT2B17O75795 530 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 CYP7B1O75881 506 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 PMS2P2O95744 297 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 CHEK2O96017 543 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 CSTAP01040 98 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 CHRNGP07510 517 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 FGF4P08620 206 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 UBTFL6P0CB48 400 aaPredicted RBP8.73□□□□□ -1.01
LIG1-209ENST00000596104 PGCP20142 388 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 APOBEC3AP31941 199 aaPredicted RBP8.73□□□□□ -1.01
LIG1-209ENST00000596104 NR4A2P43354 598 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 CCT5P48643 541 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 RPS26P62854 115 aaKnown RBP8.73□□□□□ -1.01
LIG1-209ENST00000596104 HBA1P69905 142 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 PLAURQ03405 335 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 CHRNB3Q05901 458 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 PTGR1Q14914 329 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 PCLAFQ15004 111 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 GPR68Q15743 365 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 SWI5Q1ZZU3 235 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 LSM12Q3MHD2 195 aaKnown RBP8.73□□□□□ -1.01
LIG1-209ENST00000596104 SPDYE7PQ495Y7 208 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 XKR7Q5GH72 579 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 FAM120AOSQ5T036 256 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 OR7E24Q6IFN5 339 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 FAM166AQ6J272 317 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 OLIG3Q7RTU3 272 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms