RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 NRMQ8IXM6 262 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 PARP8Q8N3A8 854 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 PIGXQ8TBF5 258 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 GNPDA2Q8TDQ7 276 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 TFAP2CQ92754 450 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 C1GALT1C1Q96EU7 318 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 SIGLEC12Q96PQ1 595 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 GPA33Q99795 319 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 TMEM43Q9BTV4 400 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 ADI1Q9BV57 179 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 GABARAPL3Q9BY60 117 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 TOR3AQ9H497 397 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 MEPEQ9NQ76 525 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 PAPOLBQ9NRJ5 636 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 KRT84Q9NSB2 600 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 DEPPQ9NTK1 212 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 MED17Q9NVC6 651 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 PLA2G3Q9NZ20 509 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 SELENONQ9NZV5 590 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 REV1Q9UBZ9 1251 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 OSGIN1Q9UJX0 560 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 FBXL2Q9UKC9 423 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 AP4B1Q9Y6B7 739 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 FRYQ5TBA9 3013 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 ZNF407Q9C0G0 2248 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 OR5H15A6NDH6 313 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 GNB5O14775 395 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 DENRO43583 198 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 GMFGO60234 142 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 NUDT14O95848 222 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 IGF2P01344 180 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 TP53P04637 393 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 CNR1P21554 472 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 FPR3P25089 353 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 TACR3P29371 465 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 IFNGR2P38484 337 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 CCL11P51671 97 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 POLR2HP52434 150 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 OC90Q02509 493 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 MERTKQ12866 999 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 RAPSNQ13702 412 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 OR1C1Q15619 314 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 ZIK1Q3SY52 487 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 SLC36A3Q495N2 470 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 C6orf52Q5T4I8 152 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 TIGD3Q6B0B8 471 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 SPINK14Q6IE38 97 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 KLHL17Q6TDP4 642 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 ARSKQ6UWY0 536 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 GRINAQ7Z429 371 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 DHRSXQ8N5I4 330 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 FDCSPQ8NFU4 85 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 OR4K17Q8NGC6 315 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 TMEM234Q8WY98 164 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 HAS2Q92819 552 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 GTPBP3Q969Y2 492 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 SLC19A3Q9BZV2 496 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 UCK2Q9BZX2 261 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 C20orf141Q9NUB4 165 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 MED31Q9Y3C7 131 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 ORC6Q9Y5N6 252 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 KIAA1549Q9HCM3 1950 aa13.38□□□□□ -0.27
SHKBP1-211ENST00000595945 A0A087WZY1 265 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 HTR3EA5X5Y0 456 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 LRRC3CA6NJW4 275 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 ELOA3DA6NLF2 546 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 G3V3Y1 287 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 H0YAE9 185 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 SLC16A6O15403 523 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 SLC25A12O75746 678 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 F10P00742 488 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 POU2F1P14859 743 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 ACADSP16219 412 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 CDH2P19022 906 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 GSTM3P21266 225 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 CAPGP40121 348 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 HTR3AP46098 478 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 DNASE1L1P49184 302 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 ALDH6A1Q02252 535 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 FOXO1Q12778 655 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 COX10Q12887 443 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 TSPAN31Q12999 210 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 KCNAB2Q13303 367 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 PLPPR5Q32ZL2 321 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 ELOA3BQ3SY89 546 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 TTC33Q6PID6 262 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 CCDC81Q6ZN84 652 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 TMPRSS11FQ6ZWK6 438 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 USP51Q70EK9 711 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 RRM2BQ7LG56 351 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 GALNT5Q7Z7M9 940 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 ADGRG3Q86Y34 549 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 CHERPQ8IWX8 916 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 ELOA3Q8NG57 546 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 PFN4Q8NHR9 129 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 RNF217Q8TC41 542 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 POC1BQ8TC44 478 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 FAM46AQ96IP4 442 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 NPAS1Q99742 590 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 ZNF556Q9HAH1 456 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms