RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 LCN1P31025 176 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 SLC6A6P31641 620 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 PYCR1P32322 319 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 DRD3P35462 400 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 GDNFP39905 211 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 RBM34P42696 430 aaKnown RBP12.24□□□□□ -0.45
VRK3-209ENST00000594948 GDI2P50395 445 aaKnown RBP12.24□□□□□ -0.45
VRK3-209ENST00000594948 ZNF81P51508 661 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 CCR6P51684 374 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 CCR9P51686 369 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 AP3S2P59780 193 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 HTRA4P83105 476 aaPredicted RBP12.24□□□□□ -0.45
VRK3-209ENST00000594948 PUDPQ08623 228 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 CRMP1Q14194 572 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 FGFBP1Q14512 234 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 MFSD13AQ14CX5 517 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 IRF4Q15306 451 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 TJAP1Q5JTD0 557 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 METTL11BQ5VVY1 283 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 RPL22L1Q6P5R6 122 aaKnown RBP12.24□□□□□ -0.45
VRK3-209ENST00000594948 GRASPQ7Z6J2 395 aaPredicted RBP12.24□□□□□ -0.45
VRK3-209ENST00000594948 OR13C2Q8NGS9 318 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 OR2T27Q8NH04 317 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 THAP4Q8WY91 577 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 OMA1Q96E52 524 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 MRPL48Q96GC5 212 aaKnown RBP12.24□□□□□ -0.45
VRK3-209ENST00000594948 SMIM10Q96HG1 83 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 DEFB118Q96PH6 123 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 GSDMCQ9BYG8 508 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 C6orf106Q9H6K1 298 aaPredicted RBP12.24□□□□□ -0.45
VRK3-209ENST00000594948 BRD7Q9NPI1 651 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 NRIP3Q9NQ35 241 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 MBNL1Q9NR56 388 aaKnown RBP12.24□□□□□ -0.45
VRK3-209ENST00000594948 KCMF1Q9P0J7 381 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 FBXL3Q9UKT7 428 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 ICAM5Q9UMF0 924 aa12.24□□□□□ -0.45
VRK3-209ENST00000594948 G3V3Q6 166 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 PDCD5O14737 125 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 BET1O15155 118 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 OR7A10O76100 309 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 TPPPO94811 219 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 WNT1P04628 370 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 MRPL3P09001 348 aaKnown RBP12.23□□□□□ -0.45
VRK3-209ENST00000594948 FUT1P19526 365 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 NOS3P29474 1203 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 ZP1P60852 638 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 MRPS10P82664 201 aaKnown RBP12.23□□□□□ -0.45
VRK3-209ENST00000594948 TAGLNQ01995 201 aaKnown RBP12.23□□□□□ -0.45
VRK3-209ENST00000594948 ILF3Q12906 894 aaKnown RBP eCLIP12.23□□□□□ -0.45
VRK3-209ENST00000594948 GPR68Q15743 365 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 DCST2Q5T1A1 773 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 VN1R4Q7Z5H5 301 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 GLRX5Q86SX6 157 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 SLC51BQ86UW2 128 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 FAM20CQ8IXL6 584 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 OR6V1Q8N148 313 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 SPICQ8N5J4 248 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 LSMEM1Q8N8F7 131 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 CDRT4Q8N9R6 151 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 ING5Q8WYH8 240 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 RSPRY1Q96DX4 576 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 ZFP3Q96NJ6 502 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 RBP7Q96R05 134 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 SPRTNQ9H040 489 aaPredicted RBP12.23□□□□□ -0.45
VRK3-209ENST00000594948 SYNPO2LQ9H987 977 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 NPDC1Q9NQX5 325 aaPredicted RBP12.23□□□□□ -0.45
VRK3-209ENST00000594948 THAP10Q9P2Z0 257 aaPredicted RBP12.23□□□□□ -0.45
VRK3-209ENST00000594948 RPS6KB2Q9UBS0 482 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 KCNK6Q9Y257 313 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 SLC17A4Q9Y2C5 497 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 CENPVL1A0A0U1RR11 272 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 A0A1W2PRG6 482 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 ZNF879B4DU55 563 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 GABARAPH6UMI1 98 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 MT-ND4P03905 459 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 ATP1B1P05026 303 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 GUSBP08236 651 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 ANKRD34CP0C6C1 535 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 CPN1P15169 458 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 TLX1P31314 330 aaPredicted RBP12.23□□□□□ -0.45
VRK3-209ENST00000594948 MNDAP41218 407 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 SLC16A1P53985 500 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 CLDN2P57739 230 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 SRP54P61011 504 aaKnown RBP12.23□□□□□ -0.45
VRK3-209ENST00000594948 RPL6Q02878 288 aaKnown RBP12.23□□□□□ -0.45
VRK3-209ENST00000594948 SUZ12Q15022 739 aaKnown RBP12.23□□□□□ -0.45
VRK3-209ENST00000594948 POU4F3Q15319 338 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 AGBL4Q5VU57 503 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 OLFML2AQ68BL7 652 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 NLRC3Q7RTR2 1065 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 OR4D9Q8NGE8 314 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 RPS4Y2Q8TD47 263 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 UTP23Q9BRU9 249 aaKnown RBP12.23□□□□□ -0.45
VRK3-209ENST00000594948 ZNF426Q9BUY5 554 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 GSX2Q9BZM3 304 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 TMEM27Q9HBJ8 222 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 MED9Q9NWA0 146 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 SPHK1Q9NYA1 384 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 POMT2Q9UKY4 750 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 MRPS23Q9Y3D9 190 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms