RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 NIPSNAP1Q9BPW8 284 aa14.26□□□□□ -0.13
PNKP-204ENST00000594661 ACER3Q9NUN7 267 aa14.26□□□□□ -0.13
PNKP-204ENST00000594661 EPHA6Q9UF33 1036 aa14.26□□□□□ -0.13
PNKP-204ENST00000594661 CES1P1Q9UKY3 287 aa14.26□□□□□ -0.13
PNKP-204ENST00000594661 NPTNQ9Y639 398 aa14.26□□□□□ -0.13
PNKP-204ENST00000594661 A0A0J9YY10 115 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 G3V3Q6 166 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 STK25O00506 426 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 MPZL2O60487 215 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 NDUFS6O75380 124 aaKnown RBP14.25□□□□□ -0.13
PNKP-204ENST00000594661 GADD45GO95257 159 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 SLC34A2O95436 690 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 RECKO95980 971 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 C8orf89P0DMQ9 161 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 ALPPL2P10696 532 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 RHCEP18577 417 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 TGM3Q08188 693 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 IL18Q14116 193 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 OPCMLQ14982 345 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 RNLSQ5VYX0 342 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 ZNF57Q68EA5 555 aaPredicted RBP14.25□□□□□ -0.13
PNKP-204ENST00000594661 CADM4Q8NFZ8 388 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 SUN3Q8TAQ9 357 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 BAHD1Q8TBE0 780 aaPredicted RBP14.25□□□□□ -0.13
PNKP-204ENST00000594661 OTUB1Q96FW1 271 aaPredicted RBP14.25□□□□□ -0.13
PNKP-204ENST00000594661 HSPA12BQ96MM6 686 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 BBS4Q96RK4 519 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 ZFYVE21Q9BQ24 234 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 KATNB1Q9BVA0 655 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 GSN-AS1Q9NRJ2 163 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 RHCGQ9UBD6 479 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 MLXQ9UH92 298 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 ING1Q9UK53 422 aaPredicted RBP14.25□□□□□ -0.13
PNKP-204ENST00000594661 VCANP13611 3396 aa14.25□□□□□ -0.13
PNKP-204ENST00000594661 SLC28A2O43868 658 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 NME1P15531 152 aaKnown RBP14.24□□□□□ -0.13
PNKP-204ENST00000594661 CALCRP30988 508 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 NTSP30990 170 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 CAPZA2P47755 286 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 PUM1Q14671 1186 aaKnown RBP eCLIP14.24□□□□□ -0.13
PNKP-204ENST00000594661 HFEQ30201 348 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 SLC48A1Q6P1K1 146 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 KANSL1Q7Z3B3 1105 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 GJD3Q8N144 294 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 OR6S1Q8NH40 331 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 ARL5BQ96KC2 179 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 SLC35G5Q96KT7 338 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 MND1Q9BWT6 205 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 TINAGL1Q9GZM7 467 aaPredicted RBP14.24□□□□□ -0.13
PNKP-204ENST00000594661 H0YGG7 62 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 TLR4O00206 839 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 GPR171O14626 319 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 DNAJB6O75190 326 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 SMIM10L1P0DMW3 83 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 OR12D1P0DN82 309 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 BCKDHBP21953 392 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 FEN1P39748 380 aaKnown RBP14.24□□□□□ -0.13
PNKP-204ENST00000594661 ARF3P61204 181 aaPredicted RBP14.24□□□□□ -0.13
PNKP-204ENST00000594661 DHODHQ02127 395 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 DEFB134Q4QY38 66 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 MEDAGQ5VYS4 303 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 JAZF1Q86VZ6 243 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 OOSP2Q86WS3 158 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 ABCA7Q8IZY2 2146 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 OR5D16Q8NGK9 328 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 LMX1AQ8TE12 382 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 CLDN23Q96B33 292 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 SMIM10Q96HG1 83 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 C10orf90Q96M02 699 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 KCTD7Q96MP8 289 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 SFXN2Q96NB2 322 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 OR51I1Q9H343 314 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 CDCP1Q9H5V8 836 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 SLC25A19Q9HC21 320 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 ZCCHC3Q9NUD5 404 aaKnown RBP14.24□□□□□ -0.13
PNKP-204ENST00000594661 TMEM74BQ9NUR3 256 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 CLN6Q9NWW5 311 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 TRPC4Q9UBN4 977 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 MALT1Q9UDY8 824 aa14.24□□□□□ -0.13
PNKP-204ENST00000594661 PPIEQ9UNP9 301 aaKnown RBP14.24□□□□□ -0.13
PNKP-204ENST00000594661 MRPS2Q9Y399 296 aaKnown RBP14.24□□□□□ -0.13
PNKP-204ENST00000594661 TCRBV16S1A1N1A0A5B0 115 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 A8MVJ9 347 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 EIF1BO60739 113 aaKnown RBP14.23□□□□□ -0.13
PNKP-204ENST00000594661 DCNP07585 359 aaKnown RBP14.23□□□□□ -0.13
PNKP-204ENST00000594661 HBQ1P09105 142 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 POU2F1P14859 743 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 EIF1P41567 113 aaKnown RBP14.23□□□□□ -0.13
PNKP-204ENST00000594661 LIMS1P48059 325 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 GDI2P50395 445 aaKnown RBP14.23□□□□□ -0.13
PNKP-204ENST00000594661 HMGA2P52926 109 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 LIM2P55344 173 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 C22orf42Q6IC83 251 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 RNF44Q7L0R7 432 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 NLRC3Q7RTR2 1065 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 CCDC116Q8IYX3 515 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 FTMTQ8N4E7 242 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 GPR32P1Q8NGA4 272 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 XAGE5Q8WWM1 108 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 GTPBP3Q969Y2 492 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms