RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ACER2Q5QJU3 275 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 ATP1A1-AS1Q5TC04 95 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 ZNF468Q5VIY5 522 aaPredicted RBP13.83□□□□□ -0.2
VRK3-207ENST00000594092 OR5M10Q6IEU7 315 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 P3H2Q8IVL5 708 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 GPR119Q8TDV5 335 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 FAM192AQ9GZU8 254 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 SH2D2AQ9NP31 389 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 ATP13A2Q9NQ11 1180 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 MEPEQ9NQ76 525 aaPredicted RBP13.83□□□□□ -0.2
VRK3-207ENST00000594092 SCN3BQ9NY72 215 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 MED31Q9Y3C7 131 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 WIF1Q9Y5W5 379 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 TRIM64CA6NLI5 447 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 KPNA4O00629 521 aaPredicted RBP13.83□□□□□ -0.2
VRK3-207ENST00000594092 GNB5O14775 395 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 NUDT14O95848 222 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 IGFBP1P08833 259 aaPredicted RBP13.83□□□□□ -0.2
VRK3-207ENST00000594092 SDHBP21912 280 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 FPR3P25089 353 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 FMO3P31513 532 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 PRKCDQ05655 676 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 AIMP2Q13155 320 aaKnown RBP13.83□□□□□ -0.2
VRK3-207ENST00000594092 BROXQ5VW32 411 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 TMEM236Q5W0B7 351 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 TMEM81Q6P7N7 255 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 ZNF773Q6PK81 442 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 ATG4DQ86TL0 474 aaPredicted RBP13.83□□□□□ -0.2
VRK3-207ENST00000594092 NXPE2Q96DL1 559 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 FER1L6-AS2Q96M78 137 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 SECISBP2Q96T21 854 aaKnown RBP13.83□□□□□ -0.2
VRK3-207ENST00000594092 ADAM19Q9H013 955 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 C20orf141Q9NUB4 165 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 HPF1Q9NWY4 346 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 KLK13Q9UKR3 277 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 TPRKBQ9Y3C4 175 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 HRH3Q9Y5N1 445 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 PCNX3Q9H6A9 2034 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 MPZL2O60487 215 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 PNMTP11086 282 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 IFI30P13284 250 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 CSNK2BP67870 215 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 TEKQ02763 1124 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 SNTA1Q13424 505 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 TBC1D25Q3MII6 688 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 SLX4IPQ5VYV7 408 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 SATL1Q86VE3 508 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 KIF18BQ86Y91 864 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 PAQR8Q8TEZ7 354 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 APH1BQ8WW43 257 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 UBE2FQ969M7 185 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 CCNL2Q96S94 520 aaPredicted RBP13.82□□□□□ -0.2
VRK3-207ENST00000594092 DSN1Q9H410 356 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 SDHAF3Q9NRP4 125 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 MED11Q9P086 117 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 NDUFA13Q9P0J0 144 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 PPP4R1LQ9P1A2 415 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 AASSQ9UDR5 926 aa13.82□□□□□ -0.2
VRK3-207ENST00000594092 IGLV3-32A0A0A0MS00 114 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 ANKUB1A6NFN9 424 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 CDC42EP2O14613 210 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 CCL3P10147 92 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 GP1BBP13224 206 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 MAKP20794 623 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 ITGA3P26006 1051 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 TACR3P29371 465 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 SUMO3P55854 103 aaPredicted RBP13.81□□□□□ -0.2
VRK3-207ENST00000594092 CTBP2P56545 445 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 FOXC1Q12948 553 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 CLN3Q13286 438 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 QPRTQ15274 297 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 NADK2Q4G0N4 442 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 PRAMEF20Q5VT98 475 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 RASSF6Q6ZTQ3 369 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 BEST3Q8N1M1 668 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 RHOXF1Q8NHV9 184 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 TEX47Q8TBZ9 253 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 BPIFA2Q96DR5 249 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 DPH1Q9BZG8 443 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 LHPPQ9H008 270 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 C12orf10Q9HB07 376 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 CPNE5Q9HCH3 593 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 TAS2R10Q9NYW0 307 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 TMEM5Q9Y2B1 443 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 DCHS1Q96JQ0 3298 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 SPTBN2O15020 2390 aa13.81□□□□□ -0.2
VRK3-207ENST00000594092 IGKV1D-42A0A075B6H8 117 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 SMIM31A0A1B0GVY4 71 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 ELOA3DA6NLF2 546 aaPredicted RBP13.8□□□□□ -0.2
VRK3-207ENST00000594092 XPNPEP2O43895 674 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 CDC40O60508 579 aaKnown RBP eCLIP13.8□□□□□ -0.2
VRK3-207ENST00000594092 FAM20BO75063 409 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 WBP4O75554 376 aaKnown RBP13.8□□□□□ -0.2
VRK3-207ENST00000594092 WT1P19544 449 aaPredicted RBP13.8□□□□□ -0.2
VRK3-207ENST00000594092 MSX1P28360 303 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 ELOA3BQ3SY89 546 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 SLC22A10Q63ZE4 541 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 C12orf73Q69YU5 71 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 SLC30A6Q6NXT4 461 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 CASP12Q6UXS9 341 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms