RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 PPP1R3DO95685 299 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 SBK2P0C263 348 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 POLR2CP19387 275 aaPredicted RBP15.25■□□□□ 0.03
LIG1-206ENST00000594067 RPS4Y1P22090 263 aaKnown RBP15.25■□□□□ 0.03
LIG1-206ENST00000594067 BMP8BP34820 402 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 SHC2P98077 582 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 COL28A1Q2UY09 1125 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 LGALSLQ3ZCW2 172 aaPredicted RBP15.25■□□□□ 0.03
LIG1-206ENST00000594067 LYPD4Q6UWN0 246 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 BMP8AQ7Z5Y6 402 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 OR4N4Q8N0Y3 316 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 OR1E3Q8WZA6 343 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 SMPDL3BQ92485 455 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 MS4A3Q96HJ5 214 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 OR2M2Q96R28 347 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 ADGRL4Q9HBW9 690 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 MEPEQ9NQ76 525 aaPredicted RBP15.25■□□□□ 0.03
LIG1-206ENST00000594067 PTTG3PQ9NZH4 202 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 NUBP2Q9Y5Y2 271 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 I3L521 148 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 SMIM10L1P0DMW3 83 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 CAMK2DQ13557 499 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 FGFBP1Q14512 234 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 POU4F3Q15319 338 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 AMZ1Q400G9 498 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 PRRT3Q5FWE3 981 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 FHL5Q5TD97 284 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 PYHIN1Q6K0P9 492 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 ENPP7Q6UWV6 458 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 SSX6Q7RTT6 188 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 YAF2Q8IY57 180 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 TMEM52Q8NDY8 209 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 OR6C4Q8NGE1 309 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 OR5J2Q8NH18 312 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 OR10G6Q8NH81 332 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 TM4SF19Q96DZ7 209 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 SMIM10Q96HG1 83 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 EVA1BQ9NVM1 165 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 MED31Q9Y3C7 131 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 SLC22A7Q9Y694 548 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 RPS10-NUDT3A0A1W2PQS6 291 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 A0A1W2PRG6 482 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 GXYLT2A0PJZ3 443 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 RIIAD1A6NNX1 92 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 MAGEB4O15481 346 aaPredicted RBP15.24■□□□□ 0.03
LIG1-206ENST00000594067 FGF17O60258 216 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 FZD7O75084 574 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 PYCR1P32322 319 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 HCCSP53701 268 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 PPP2CBP62714 309 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 PPP2CAP67775 309 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 ENPP2Q13822 863 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 TMPRSS11FQ6ZWK6 438 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 ZAR1Q86SH2 424 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 ZNF614Q8N883 585 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 HGDQ93099 445 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 PEX11GQ96HA9 241 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 KXD1Q9BQD3 176 aa15.24■□□□□ 0.03
LIG1-206ENST00000594067 DPCDQ9BVM2 203 aaPredicted RBP15.24■□□□□ 0.03
LIG1-206ENST00000594067 A0A0B4J203 849 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 C5orf67F2Z3F1 127 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 PLRG1O43660 514 aaKnown RBP15.23■□□□□ 0.03
LIG1-206ENST00000594067 GIFP27352 417 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 PLAURQ03405 335 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 ACSM3Q53FZ2 586 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 GPR139Q6DWJ6 353 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 ZC3H14Q6PJT7 736 aaKnown RBP15.23■□□□□ 0.03
LIG1-206ENST00000594067 SYT9Q86SS6 491 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 SLC44A3Q8N4M1 653 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 RFLNBQ8N5W9 214 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 LSMEM1Q8N8F7 131 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 C7orf57Q8NEG2 295 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 OR4C6Q8NH72 309 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 FLVCR1-AS1Q8TAF5 88 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 TSACCQ96A04 125 aaPredicted RBP15.23■□□□□ 0.03
LIG1-206ENST00000594067 PGLYRP3Q96LB9 341 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 INPP5EQ9NRR6 644 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 SLC35A3Q9Y2D2 325 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 RWDD3Q9Y3V2 267 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 H0Y8X5 98 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 MPC2O95563 127 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 CD3GP09693 182 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 SDHBP21912 280 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 GABRA3P34903 492 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 ADPRHP54922 357 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 MFSD13AQ14CX5 517 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 HACD4Q5VWC8 232 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 GPALPP1Q8IXQ4 340 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 ARL14Q8N4G2 192 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 OR5T3Q8NGG3 340 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 YIPF5Q969M3 257 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 PTCHD1Q96NR3 888 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 TNFRSF13CQ96RJ3 184 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 CACNG6Q9BXT2 260 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 CERS4Q9HA82 394 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 RNF215Q9Y6U7 377 aa15.23■□□□□ 0.03
LIG1-206ENST00000594067 CT62P0C5K7 136 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 ACTR1BP42025 376 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 ACTR1AP61163 376 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 SNTA1Q13424 505 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms