RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CLK1P49759 484 aaKnown RBP11.77□□□□□ -0.53
APOC1-209ENST00000592885 ATP5J2P56134 94 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 TNFAIP8L3Q5GJ75 292 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 TNFAIP8L2Q6P589 184 aaPredicted RBP11.77□□□□□ -0.53
APOC1-209ENST00000592885 DNAJC14Q6Y2X3 702 aaPredicted RBP11.77□□□□□ -0.53
APOC1-209ENST00000592885 FRRS1Q6ZNA5 592 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 GRINAQ7Z429 371 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 GALNT5Q7Z7M9 940 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 P2RY8Q86VZ1 359 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 CMIPQ8IY22 773 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 CLEC4FQ8N1N0 589 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 CIARTQ8N365 385 aaPredicted RBP11.77□□□□□ -0.53
APOC1-209ENST00000592885 TRIML2Q8N7C3 387 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 PIWIL2Q8TC59 973 aaKnown RBP11.77□□□□□ -0.53
APOC1-209ENST00000592885 XAGE5Q8WWM1 108 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 ZNF524Q96C55 264 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 ROPN1LQ96C74 230 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 PPP1R36Q96LQ0 422 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 CCDC115Q96NT0 180 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 SLC35A5Q9BS91 424 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 CCDC106Q9BWC9 280 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 C20orf27Q9GZN8 174 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 QRSL1Q9H0R6 528 aaKnown RBP11.77□□□□□ -0.53
APOC1-209ENST00000592885 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.77□□□□□ -0.53
APOC1-209ENST00000592885 MARCOQ9UEW3 520 aaPredicted RBP11.77□□□□□ -0.53
APOC1-209ENST00000592885 CHRNA9Q9UGM1 479 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 LIPT1Q9Y234 373 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 HDGFL3Q9Y3E1 203 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 ROS1P08922 2347 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 TRIM64A6NGJ6 449 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 TRIM64BA6NI03 449 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 CPSF4O95639 269 aaKnown RBP11.76□□□□□ -0.53
APOC1-209ENST00000592885 BGNP21810 368 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 S100A3P33764 101 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 CHI3L1P36222 383 aaPredicted RBP11.76□□□□□ -0.53
APOC1-209ENST00000592885 MAGEA8P43361 318 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 HTR3AP46098 478 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 PHC1P78364 1004 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 FUT5Q11128 374 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 STX3Q13277 289 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 CAPRIN1Q14444 709 aaKnown RBP11.76□□□□□ -0.53
APOC1-209ENST00000592885 MAPK14Q16539 360 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 ZNF672Q499Z4 452 aaPredicted RBP11.76□□□□□ -0.53
APOC1-209ENST00000592885 SPANXN4Q5MJ08 99 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 TIMM23BQ5SRD1 257 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 SEZ6L2Q6UXD5 910 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 Q71RC1 249 aaPredicted RBP11.76□□□□□ -0.53
APOC1-209ENST00000592885 MTDHQ86UE4 582 aaKnown RBP11.76□□□□□ -0.53
APOC1-209ENST00000592885 ANKRD46Q86W74 232 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 ARFGAP2Q8N6H7 521 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 ZNF563Q8TA94 476 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 PIGXQ8TBF5 258 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 RAB3IL1Q8TBN0 382 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 PMM1Q92871 262 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 TRMT61AQ96FX7 289 aaKnown RBP11.76□□□□□ -0.53
APOC1-209ENST00000592885 ZNF300Q96RE9 604 aaPredicted RBP11.76□□□□□ -0.53
APOC1-209ENST00000592885 NUF2Q9BZD4 464 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 PRDM4Q9UKN5 801 aa11.76□□□□□ -0.53
APOC1-209ENST00000592885 GOLGA8QA0A0J9YX86 632 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 GOLGA8OA6NCC3 632 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 GOLGA8NF8WBI6 632 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 OVOL3O00110 214 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 FAAHO00519 579 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 GPR171O14626 319 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 CLOCKO15516 846 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 DANCRP0C864 163 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 MAP2K6P52564 334 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 SLC16A1P53985 500 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 KCNJ10P78508 379 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 BSPH1Q075Z2 132 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 GNA13Q14344 377 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 PPA1Q15181 289 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 TSC22D1Q15714 1073 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 FAM174BQ3ZCQ3 159 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 GPAT3Q53EU6 434 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 SPATA19Q7Z5L4 167 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 ZNF100Q8IYN0 542 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 LILRB1Q8NHL6 650 aaPredicted RBP11.75□□□□□ -0.53
APOC1-209ENST00000592885 ZNF75CPQ92670 426 aaPredicted RBP11.75□□□□□ -0.53
APOC1-209ENST00000592885 RAB8BQ92930 207 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 MUCL1Q96DR8 90 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 TRNT1Q96Q11 434 aaKnown RBP11.75□□□□□ -0.53
APOC1-209ENST00000592885 GRIP2Q9C0E4 1043 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 CTPS2Q9NRF8 586 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 FAIMQ9NVQ4 179 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 AIG1Q9NVV5 245 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 PRSS50Q9UI38 385 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 RAB21Q9UL25 225 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 LAMP3Q9UQV4 416 aa11.75□□□□□ -0.53
APOC1-209ENST00000592885 FN1P02751 2386 aaKnown RBP11.75□□□□□ -0.53
APOC1-209ENST00000592885 TRPC5OSA6NMA1 111 aa11.74□□□□□ -0.53
APOC1-209ENST00000592885 ZNF716A6NP11 495 aa11.74□□□□□ -0.53
APOC1-209ENST00000592885 HMGN4O00479 90 aa11.74□□□□□ -0.53
APOC1-209ENST00000592885 SMAD7O15105 426 aaKnown RBP11.74□□□□□ -0.53
APOC1-209ENST00000592885 LYZL6O75951 148 aa11.74□□□□□ -0.53
APOC1-209ENST00000592885 PGM3O95394 542 aa11.74□□□□□ -0.53
APOC1-209ENST00000592885 TFPIP10646 304 aa11.74□□□□□ -0.53
APOC1-209ENST00000592885 UQCRBP14927 111 aa11.74□□□□□ -0.53
APOC1-209ENST00000592885 GGT1P19440 569 aa11.74□□□□□ -0.53
APOC1-209ENST00000592885 BST1Q10588 318 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms