RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 SMAP2Q8WU79 429 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-205ENST00000592333 ZNF75CPQ92670 426 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-205ENST00000592333 ZNF524Q96C55 264 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 ZHX1-C8orf76Q96EF9 292 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 OR5B2Q96R09 309 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 OR51I1Q9H343 314 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 FAIMQ9NVQ4 179 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 MKLN1Q9UL63 735 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 HDGFL3Q9Y3E1 203 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 WDR45Q9Y484 360 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 TLN2Q9Y4G6 2542 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 SULT2B1O00204 365 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 GPR171O14626 319 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 H6PDO95479 791 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 THBS1P07996 1170 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 CREB1P16220 341 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 HTR3AP46098 478 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 RPS26P62854 115 aaKnown RBP16.7■□□□□ 0.26
CCDC43-205ENST00000592333 CAPRIN1Q14444 709 aaKnown RBP16.7■□□□□ 0.26
CCDC43-205ENST00000592333 CASP8Q14790 479 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 PPA1Q15181 289 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 SAXO2Q658L1 398 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 ABLIM2Q6H8Q1 611 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 TYW3Q6IPR3 259 aaKnown RBP16.7■□□□□ 0.26
CCDC43-205ENST00000592333 GRINAQ7Z429 371 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 CMIPQ8IY22 773 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 ZNF781Q8N8C0 355 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 NEURL3Q96EH8 262 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 CCDC106Q9BWC9 280 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 TRIM2Q9C040 744 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 CHRNA9Q9UGM1 479 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 LIPT1Q9Y234 373 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 TRAPPC4Q9Y296 219 aa16.7■□□□□ 0.26
CCDC43-205ENST00000592333 IGHV3-15A0A0B4J1V0 119 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 CLOCKO15516 846 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 UBTFL6P0CB48 400 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-205ENST00000592333 DHRS4L1P0CG22 281 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 GGT1P19440 569 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 ANXA11P50995 505 aaKnown RBP16.69■□□□□ 0.26
CCDC43-205ENST00000592333 KCNJ10P78508 379 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 BSPH1Q075Z2 132 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 CHI3L2Q15782 390 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 PDCD2Q16342 344 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-205ENST00000592333 OGFOD2Q6N063 350 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 ZNF100Q8IYN0 542 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 ZNF619Q8N2I2 560 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 XAGE5Q8WWM1 108 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 ROPN1LQ96C74 230 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 BARX1Q9HBU1 254 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-205ENST00000592333 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-205ENST00000592333 BTNL2Q9UIR0 455 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 MGAT4BQ9UQ53 548 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 FREM1Q5H8C1 2179 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 JMJD1CQ15652 2540 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 CSPG4Q6UVK1 2322 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 USF3Q68DE3 2245 aa16.69■□□□□ 0.26
CCDC43-205ENST00000592333 A0A1W2PP18 115 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 DPRXA6NFQ7 191 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 RGS16O15492 202 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-205ENST00000592333 ITM2AO43736 263 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 CYP7B1O75881 506 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 SOD3P08294 240 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 OR12D1P0DN82 309 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 LBPP18428 481 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 MAGEA8P43361 318 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 SLC1A6P48664 564 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 KHKP50053 298 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 RNF144AP50876 292 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-205ENST00000592333 SLC16A1P53985 500 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 TSC22D1Q15714 1073 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 CLEC12BQ2HXU8 276 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 FBXW9Q5XUX1 488 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 CROCCP2Q86T23 111 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 TRIML2Q8N7C3 387 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 ZNF563Q8TA94 476 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 PIGXQ8TBF5 258 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 CCDC115Q96NT0 180 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 ZNF300Q96RE9 604 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-205ENST00000592333 QRSL1Q9H0R6 528 aaKnown RBP16.68■□□□□ 0.26
CCDC43-205ENST00000592333 PRSS50Q9UI38 385 aa16.68■□□□□ 0.26
CCDC43-205ENST00000592333 PRR14LQ5THK1 2151 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 OR5H1A6NKK0 313 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 FAAHO00519 579 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 ZNF208O43345 1280 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 EIF1BO60739 113 aaKnown RBP16.67■□□□□ 0.26
CCDC43-205ENST00000592333 IGHV1-2P23083 117 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 PHC1P78364 1004 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 HPCAP84074 193 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 TNK1Q13470 666 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 MAPK14Q16539 360 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 KRT71Q3SY84 523 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 ALKBH2Q6NS38 261 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 FRRS1Q6ZNA5 592 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 DTX2Q86UW9 622 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 ARFGAP2Q8N6H7 521 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 ZNF433Q8N7K0 673 aaPredicted RBP16.67■□□□□ 0.26
CCDC43-205ENST00000592333 TRNT1Q96Q11 434 aaKnown RBP16.67■□□□□ 0.26
CCDC43-205ENST00000592333 ALG2Q9H553 416 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 MEAF6Q9HAF1 191 aa16.67■□□□□ 0.26
CCDC43-205ENST00000592333 CISD1Q9NZ45 108 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms