RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 TRIM8Q9BZR9 551 aa10.69□□□□□ -0.7
LIG3-213ENST00000590630 UCK2Q9BZX2 261 aa10.69□□□□□ -0.7
LIG3-213ENST00000590630 NANOGQ9H9S0 305 aa10.69□□□□□ -0.7
LIG3-213ENST00000590630 RNF122Q9H9V4 155 aa10.69□□□□□ -0.7
LIG3-213ENST00000590630 TIGARQ9NQ88 270 aa10.69□□□□□ -0.7
LIG3-213ENST00000590630 SERINC1Q9NRX5 453 aa10.69□□□□□ -0.7
LIG3-213ENST00000590630 RLIMQ9NVW2 624 aa10.69□□□□□ -0.7
LIG3-213ENST00000590630 MCTS1Q9ULC4 181 aaKnown RBP10.69□□□□□ -0.7
LIG3-213ENST00000590630 ANGPT4Q9Y264 503 aa10.69□□□□□ -0.7
LIG3-213ENST00000590630 SPIN1Q9Y657 262 aaPredicted RBP10.69□□□□□ -0.7
LIG3-213ENST00000590630 APCP25054 2843 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 ABCA12Q86UK0 2595 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 A0A0J9YW62 118 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 NKX2-6A6NCS4 301 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 PRORSD1PA6NEY8 169 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 AP3D1O14617 1153 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 SERPINB7O75635 380 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 SYNGR4O95473 234 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 OPN1LWP04000 364 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 SLC7A1P30825 629 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 SLC1A3P43003 542 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 IDH2P48735 452 aaKnown RBP10.68□□□□□ -0.7
LIG3-213ENST00000590630 MAP2K6P52564 334 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 CARD18P57730 90 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 EPS8Q12929 822 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 SELPLGQ14242 412 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 TMEM176BQ3YBM2 270 aaPredicted RBP10.68□□□□□ -0.7
LIG3-213ENST00000590630 POMZP3Q6PJE2 187 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 PLXDC2Q6UX71 529 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 ZNF550Q7Z398 422 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 PTOV1Q86YD1 416 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 GCNT2Q8N0V5 402 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 CLIP4Q8N3C7 705 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 OR10A6Q8NH74 314 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 FIG4Q92562 907 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 CPNE4Q96A23 557 aaPredicted RBP10.68□□□□□ -0.7
LIG3-213ENST00000590630 INTS12Q96CB8 462 aaKnown RBP10.68□□□□□ -0.7
LIG3-213ENST00000590630 LRRC46Q96FV0 321 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 SLC39A3Q9BRY0 314 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 CHRNA9Q9UGM1 479 aa10.68□□□□□ -0.7
LIG3-213ENST00000590630 CACNA1DQ01668 2161 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 NAV2Q8IVL1 2488 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 MAST4O15021 2626 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 HNRNPRO43390 633 aaKnown RBP10.67□□□□□ -0.7
LIG3-213ENST00000590630 CXCL13O43927 109 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 GKN3PP0CG01 181 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 COX4I1P13073 169 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 SHC1P29353 583 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 AQP1P29972 269 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 PCGF2P35227 344 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 ACAA2P42765 397 aaKnown RBP10.67□□□□□ -0.7
LIG3-213ENST00000590630 ASCL1P50553 236 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 POLR2HP52434 150 aaKnown RBP10.67□□□□□ -0.7
LIG3-213ENST00000590630 PCBP3P57721 371 aaKnown RBP10.67□□□□□ -0.7
LIG3-213ENST00000590630 COPZ1P61923 177 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 FOXF2Q12947 444 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 FBXL19-AS1Q494R0 122 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 SYT14P1Q58G82 188 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 RABL3Q5HYI8 236 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 INTS11Q5TA45 600 aaKnown RBP10.67□□□□□ -0.7
LIG3-213ENST00000590630 HIST2H2BCQ6DN03 193 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 DHRS4L2Q6PKH6 230 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 ZZZ3Q8IYH5 903 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 POU5F2Q8N7G0 328 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 ACBD4Q8NC06 268 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 RELL2Q8NC24 303 aaPredicted RBP10.67□□□□□ -0.7
LIG3-213ENST00000590630 ATP6V1C2Q8NEY4 427 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 OSTF1Q92882 214 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 RCN3Q96D15 328 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 CMTM5Q96DZ9 223 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 REXO5Q96IC2 774 aaKnown RBP10.67□□□□□ -0.7
LIG3-213ENST00000590630 ECSITQ9BQ95 431 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 PRRG4Q9BZD6 226 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 MYLK2Q9H1R3 596 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 PIGMQ9H3S5 423 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 NPDC1Q9NQX5 325 aaPredicted RBP10.67□□□□□ -0.7
LIG3-213ENST00000590630 CTPS2Q9NRF8 586 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 FOXD3Q9UJU5 478 aaPredicted RBP10.67□□□□□ -0.7
LIG3-213ENST00000590630 CHST2Q9Y4C5 530 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 LRBAP50851 2863 aa10.67□□□□□ -0.7
LIG3-213ENST00000590630 A0A1W2PNV4 684 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 EEF1E1-BLOC1S5C9J1V9 151 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 C19orf84I3L1E1 186 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 EEF1E1O43324 174 aaKnown RBP10.66□□□□□ -0.7
LIG3-213ENST00000590630 TNFSF13O75888 250 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 AQP8O94778 261 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 COX6B1P14854 86 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 IGFBP2P18065 325 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 CLK1P49759 484 aaKnown RBP10.66□□□□□ -0.7
LIG3-213ENST00000590630 GZMMP51124 257 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 RAC3P60763 192 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 ZNF239Q16600 458 aaKnown RBP10.66□□□□□ -0.7
LIG3-213ENST00000590630 VMACQ2NL98 169 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 GTF2IRD2BQ6EKJ0 949 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 WBP2NLQ6ICG8 309 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 PPP4R4Q6NUP7 873 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 ERICH5Q6P6B1 374 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 ARPINQ7Z6K5 226 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 PIGWQ7Z7B1 504 aa10.66□□□□□ -0.7
LIG3-213ENST00000590630 PATL1Q86TB9 770 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms