RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 STOML1Q9UBI4 398 aa16.27■□□□□ 0.2
DDX39A-212ENST00000590260 MCTS1Q9ULC4 181 aaKnown RBP16.27■□□□□ 0.2
DDX39A-212ENST00000590260 FAAHO00519 579 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 SMAD9O15198 467 aaKnown RBP16.26■□□□□ 0.19
DDX39A-212ENST00000590260 SMNDC1O75940 238 aaKnown RBP eCLIP16.26■□□□□ 0.192e-7■■■□□ 15.3
DDX39A-212ENST00000590260 PGM3O95394 542 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 AGTR1P30556 359 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 MDH1P40925 334 aaKnown RBP16.26■□□□□ 0.19
DDX39A-212ENST00000590260 MYBPHQ13203 477 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 RNF220Q5VTB9 566 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 GRINAQ7Z429 371 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 PTOV1Q86YD1 416 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 PEX5LQ8IYB4 626 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 NFKBIDQ8NI38 313 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 ZNF563Q8TA94 476 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 TMEM234Q8WY98 164 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 DNAJA3Q96EY1 480 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 ZNF559Q9BR84 538 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 OR11A1Q9GZK7 315 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 RABEP2Q9H5N1 569 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 CALML5Q9NZT1 146 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 LEF1Q9UJU2 399 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-212ENST00000590260 OSGIN1Q9UJX0 560 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 TRIM33Q9UPN9 1127 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 NDUFAF1Q9Y375 327 aa16.26■□□□□ 0.19
DDX39A-212ENST00000590260 TMEM72A0PK05 275 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 ATP8B1O43520 1251 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 FRS3O43559 492 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 GCM2O75603 506 aaPredicted RBP16.25■□□□□ 0.19
DDX39A-212ENST00000590260 CTAG2O75638 210 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 SYNGR4O95473 234 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 THBS1P07996 1170 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 VIMP08670 466 aaKnown RBP16.25■□□□□ 0.19
DDX39A-212ENST00000590260 PABPC4LP0CB38 370 aaKnown RBP16.25■□□□□ 0.19
DDX39A-212ENST00000590260 APOBEC1P41238 236 aaKnown RBP16.25■□□□□ 0.19
DDX39A-212ENST00000590260 ARFIP2P53365 341 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 LIN52Q52LA3 116 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 SYT14P1Q58G82 188 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 EEF1A1P5Q5VTE0 462 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 PRAMEF8Q5VWM4 474 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 PRAMEF7Q5VXH5 474 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 NUFIP2Q7Z417 695 aaKnown RBP16.25■□□□□ 0.19
DDX39A-212ENST00000590260 DHDDSQ86SQ9 333 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 TSPEARQ8WU66 669 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 C10orf82Q8WW14 230 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 NRGNQ92686 78 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 CPNE4Q96A23 557 aaPredicted RBP16.25■□□□□ 0.19
DDX39A-212ENST00000590260 ANKRD27Q96NW4 1050 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 OR5B2Q96R09 309 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 CGREF1Q99674 301 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 SPATA9Q9BWV2 254 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 PRRG4Q9BZD6 226 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 ADAM19Q9H013 955 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 RAD21L1Q9H4I0 556 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 SAR1AQ9NR31 198 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 PLSCR4Q9NRQ2 329 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 THUMPD1Q9NXG2 353 aaKnown RBP16.25■□□□□ 0.19
DDX39A-212ENST00000590260 CHRNA9Q9UGM1 479 aa16.25■□□□□ 0.19
DDX39A-212ENST00000590260 ZC3H12DA2A288 527 aaKnown RBP16.24■□□□□ 0.19
DDX39A-212ENST00000590260 CFAP73A6NFT4 308 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 GJE1A6NN92 205 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 ZNF814B7Z6K7 855 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 FXYD1O00168 92 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 TPST1O60507 370 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 TROVE2P10155 538 aaKnown RBP eCLIP16.24■□□□□ 0.19
DDX39A-212ENST00000590260 EDNRAP25101 427 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 TACR3P29371 465 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 CPOXP36551 454 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 CPA2P48052 419 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 DIO1P49895 249 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 MTPNP58546 118 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 RAC3P60763 192 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 KLF10Q13118 480 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 GLIPR1L2Q4G1C9 344 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 HSP90B2PQ58FF3 399 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 PDSS1Q5T2R2 415 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 GCNT6Q5T4J0 391 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 TMPPEQ6ZT21 453 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 FCRLAQ7L513 359 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 SERPINA11Q86U17 422 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 TUSC5Q8IXB3 177 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 OR6K3Q8NGY3 331 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 BBS10Q8TAM1 723 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 FAM222BQ8WU58 562 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 PSD2Q9BQI7 771 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 WFDC6Q9BQY6 131 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 GPATCH1Q9BRR8 931 aaKnown RBP16.24■□□□□ 0.19
DDX39A-212ENST00000590260 TMEM38AQ9H6F2 299 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.24■□□□□ 0.19
DDX39A-212ENST00000590260 OTOGQ6ZRI0 2925 aa16.24■□□□□ 0.19
DDX39A-212ENST00000590260 TMED7-TICAM2A0A0A6YYA0 188 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 A0A1W2PPR1 153 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 TUBAL3A6NHL2 446 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 RAMP1O60894 148 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 IMPDH2P12268 514 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 CCNA2P20248 432 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 PPIBP23284 216 aaKnown RBP16.23■□□□□ 0.19
DDX39A-212ENST00000590260 SLC7A1P30825 629 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 CD79BP40259 229 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 SLC1A3P43003 542 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms