RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 HNRNPCL1O60812 293 aaKnown RBP10.79□□□□□ -0.68
TPM4-212ENST00000590180 SS18L1O75177 396 aaPredicted RBP10.79□□□□□ -0.68
TPM4-212ENST00000590180 NUDT7P0C024 238 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 HNRNPCL4P0DMR1 293 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 RAC3P60763 192 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 IRX1P78414 480 aaPredicted RBP10.79□□□□□ -0.68
TPM4-212ENST00000590180 LARS2Q15031 903 aaKnown RBP10.79□□□□□ -0.68
TPM4-212ENST00000590180 RNPS1Q15287 305 aaKnown RBP10.79□□□□□ -0.68
TPM4-212ENST00000590180 POU4F3Q15319 338 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 GUSBP1Q15486 140 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 MAPK11Q15759 364 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 ZNF239Q16600 458 aaKnown RBP10.79□□□□□ -0.68
TPM4-212ENST00000590180 RPS26P11Q5JNZ5 115 aaPredicted RBP10.79□□□□□ -0.68
TPM4-212ENST00000590180 PAGE3Q5JUK9 113 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 MRPL2Q5T653 305 aaKnown RBP10.79□□□□□ -0.68
TPM4-212ENST00000590180 ANKRD34AQ69YU3 496 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 C3orf33Q6P1S2 294 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 TMPPEQ6ZT21 453 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 GRINAQ7Z429 371 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 STK32CQ86UX6 486 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 CDC20BQ86Y33 519 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 TUSC5Q8IXB3 177 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 FAM71CQ8NEG0 241 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 ABHD3Q8WU67 409 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 DNAJA3Q96EY1 480 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 TMEM19Q96HH6 336 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 WFIKKN1Q96NZ8 548 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 MED18Q9BUE0 208 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 C12orf49Q9H741 205 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 COQ10BQ9H8M1 238 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 FANCFQ9NPI8 374 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 EXOSC3Q9NQT5 275 aaKnown RBP10.79□□□□□ -0.68
TPM4-212ENST00000590180 RLIMQ9NVW2 624 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 TMEM45AQ9NWC5 275 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 ZNF446Q9NWS9 450 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 KLHL28Q9NXS3 571 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 TRIM33Q9UPN9 1127 aa10.79□□□□□ -0.68
TPM4-212ENST00000590180 SPIN1Q9Y657 262 aaPredicted RBP10.79□□□□□ -0.68
TPM4-212ENST00000590180 ANKRD17O75179 2603 aaKnown RBP10.79□□□□□ -0.68
TPM4-212ENST00000590180 TMED7-TICAM2A0A0A6YYA0 188 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 A0A1W2PP18 115 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 FAM221AA4D161 298 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 EVPLLA8MZ36 301 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 ADAM11O75078 769 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 YES1P07947 543 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 GKN3PP0CG01 181 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 NID1P14543 1247 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 UQCRBP14927 111 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 CD1EP15812 388 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 UGT2B10P36537 528 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 HTR3AP46098 478 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 DIO1P49895 249 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 COPZ1P61923 177 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 SF3A3Q12874 501 aaKnown RBP eCLIP10.78□□□□□ -0.68
TPM4-212ENST00000590180 FADDQ13158 208 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 LIN52Q52LA3 116 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 HSP90B2PQ58FF3 399 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 SYT14P1Q58G82 188 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 BEND4Q6ZU67 534 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 ADGRG3Q86Y34 549 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 ZNF440Q8IYI8 595 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 SLC43A2Q8N370 569 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 RNF128Q8TEB7 428 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 SLC25A43Q8WUT9 341 aaPredicted RBP10.78□□□□□ -0.68
TPM4-212ENST00000590180 MAL2Q969L2 176 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 ZNF775Q96BV0 537 aaPredicted RBP10.78□□□□□ -0.68
TPM4-212ENST00000590180 ZC3HAV1LQ96H79 300 aaKnown RBP10.78□□□□□ -0.68
TPM4-212ENST00000590180 CCDC106Q9BWC9 280 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 ARMC7Q9H6L4 198 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 SLC25A37Q9NYZ2 338 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.78□□□□□ -0.68
TPM4-212ENST00000590180 CHRNA9Q9UGM1 479 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 EDARQ9UNE0 448 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 TMED7Q9Y3B3 224 aa10.78□□□□□ -0.68
TPM4-212ENST00000590180 PDZD2O15018 2839 aa10.77□□□□□ -0.68
TPM4-212ENST00000590180 VIMP08670 466 aaKnown RBP10.77□□□□□ -0.69
TPM4-212ENST00000590180 RPS4Y1P22090 263 aaKnown RBP10.77□□□□□ -0.69
TPM4-212ENST00000590180 PPIBP23284 216 aaKnown RBP10.77□□□□□ -0.69
TPM4-212ENST00000590180 FKBP2P26885 142 aaKnown RBP10.77□□□□□ -0.69
TPM4-212ENST00000590180 TACR3P29371 465 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 AGTR1P30556 359 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 DNAJA1P31689 397 aaKnown RBP10.77□□□□□ -0.69
TPM4-212ENST00000590180 SLC1A3P43003 542 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 PCYT1AP49585 367 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 OR2B6P58173 313 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 CSNK2A1P68400 391 aaPredicted RBP10.77□□□□□ -0.69
TPM4-212ENST00000590180 PLAURQ03405 335 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 RASGEF1BQ0VAM2 473 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 EPS8Q12929 822 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 ZNF311Q5JNZ3 666 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 LRIF1Q5T3J3 769 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 GCNT6Q5T4J0 391 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 ZNF836Q6ZNA1 936 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 ZNF550Q7Z398 422 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 NUFIP2Q7Z417 695 aaKnown RBP10.77□□□□□ -0.69
TPM4-212ENST00000590180 MSRB3Q8IXL7 192 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 CLIP4Q8N3C7 705 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 CADM2Q8N3J6 435 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 ZHX1-C8orf76Q96EF9 292 aa10.77□□□□□ -0.69
TPM4-212ENST00000590180 SIKE1Q9BRV8 207 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms