RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 HOXB6P17509 224 aaKnown RBP12.31□□□□□ -0.44
VMP1-210ENST00000589823 BMP7P18075 431 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 POU3F2P20265 443 aaPredicted RBP12.31□□□□□ -0.44
VMP1-210ENST00000589823 RAC1P63000 192 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 HSF1Q00613 529 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 RBPJQ06330 500 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 NHSL2Q5HYW2 709 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 ALG10BQ5I7T1 473 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 SWT1Q5T5J6 900 aaKnown RBP12.31□□□□□ -0.44
VMP1-210ENST00000589823 C3orf33Q6P1S2 294 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 PRICKLE2Q7Z3G6 844 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 ZDHHC21Q8IVQ6 265 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 ZNF843Q8N446 348 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 ADAMTS16Q8TE57 1224 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 PHF10Q8WUB8 498 aaKnown RBP12.31□□□□□ -0.44
VMP1-210ENST00000589823 SMPDL3BQ92485 455 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 SLC41A3Q96GZ6 507 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 C7orf34Q96L11 122 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 PRRC1Q96M27 445 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 C12orf10Q9HB07 376 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 OSGIN1Q9UJX0 560 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 AURKCQ9UQB9 309 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 TMED7Q9Y3B3 224 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 ZNF337Q9Y3M9 751 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 AP4B1Q9Y6B7 739 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 ENPP4Q9Y6X5 453 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 NCKAP5O14513 1909 aa12.31□□□□□ -0.44
VMP1-210ENST00000589823 A0A0B4J2E0 115 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 A0A1B0GX12 115 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 TCRBV3S1A0A5B6 114 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 OR14I1A6ND48 311 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 ELOA3DA6NLF2 546 aaPredicted RBP12.3□□□□□ -0.44
VMP1-210ENST00000589823 GJE1A6NN92 205 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 NPIPA2E9PIF3 369 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 NPIPA3F8WFD2 350 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 BCKDKO14874 412 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 OR5F1O95221 314 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 SEMG1P04279 462 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 RAP2AP10114 183 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 RHCEP18577 417 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 CCNA2P20248 432 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 FKBP2P26885 142 aaKnown RBP12.3□□□□□ -0.44
VMP1-210ENST00000589823 PTGS2P35354 604 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 YAP1P46937 504 aaKnown RBP12.3□□□□□ -0.44
VMP1-210ENST00000589823 ERFP50548 548 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 MAP2K6P52564 334 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 CDH12P55289 794 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 VLDLRP98155 873 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 ST3GAL3Q11203 375 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 PIN1Q13526 163 aaPredicted RBP12.3□□□□□ -0.44
VMP1-210ENST00000589823 ELOA3BQ3SY89 546 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 WLSQ5T9L3 541 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 ZNF771Q7L3S4 317 aaPredicted RBP12.3□□□□□ -0.44
VMP1-210ENST00000589823 ATG4DQ86TL0 474 aaPredicted RBP12.3□□□□□ -0.44
VMP1-210ENST00000589823 C10orf67Q8IYJ2 551 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 ADGRG5Q8IZF4 528 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 LILRA2Q8N149 483 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 ATP6V1C2Q8NEY4 427 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 ELOA3Q8NG57 546 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 SLC25A43Q8WUT9 341 aaPredicted RBP12.3□□□□□ -0.44
VMP1-210ENST00000589823 CANT1Q8WVQ1 401 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 DDIT4LQ96D03 193 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 ZNF300Q96RE9 604 aaPredicted RBP12.3□□□□□ -0.44
VMP1-210ENST00000589823 ZNF347Q96SE7 839 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 FNDC11Q9BVV2 318 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 YY1AP1Q9H869 796 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 IL1RAPQ9NPH3 570 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 NDUFAF4Q9P032 175 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 SPRR3Q9UBC9 169 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 CHRNA9Q9UGM1 479 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 RIMS3Q9UJD0 308 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 ACAD8Q9UKU7 415 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 SLC7A7Q9UM01 511 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 HEATR5AQ86XA9 2040 aa12.3□□□□□ -0.44
VMP1-210ENST00000589823 ANKRD65E5RJM6 399 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 J3KTA2 159 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 CHP2O43745 196 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 TFPIP10646 304 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 THRBP10828 461 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 ABOP16442 354 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 STARP49675 285 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 CRYZQ08257 329 aaKnown RBP12.29□□□□□ -0.44
VMP1-210ENST00000589823 CCNIQ14094 377 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 KPNB1Q14974 876 aaKnown RBP12.29□□□□□ -0.44
VMP1-210ENST00000589823 BCL2A1Q16548 175 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 VASNQ6EMK4 673 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 GDF7Q7Z4P5 450 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 ADGRG3Q86Y34 549 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 PM20D2Q8IYS1 436 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 UBQLNLQ8IYU4 475 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 MEIOBQ8N635 442 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 ST6GALNAC3Q8NDV1 305 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 SLC38A4Q969I6 547 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 MPP4Q96JB8 637 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 TIMP4Q99727 224 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 TMEM185BQ9H7F4 350 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 TNFRSF10DQ9UBN6 386 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 A4GNTQ9UNA3 340 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 ZFYVE26Q68DK2 2539 aa12.29□□□□□ -0.44
VMP1-210ENST00000589823 PCNX3Q9H6A9 2034 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms