RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 TRAPPC13A5PLN9 417 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 CDC40O60508 579 aaKnown RBP eCLIP22.52■■□□□ 1.2
RFX1-205ENST00000589239 ELAVL4P26378 380 aaKnown RBP22.52■■□□□ 1.2
RFX1-205ENST00000589239 LIMS1P48059 325 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 TMPRSS3P57727 454 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 ST3GAL3Q11203 375 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 KRT80Q6KB66 452 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 ZNF613Q6PF04 617 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 TBPL2Q6SJ96 375 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 SLC7A13Q8TCU3 470 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 HAS2Q92819 552 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 JSRP1Q96MG2 331 aaPredicted RBP22.52■■□□□ 1.2
RFX1-205ENST00000589239 ALPK1Q96QP1 1244 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 DSN1Q9H410 356 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 COQ10BQ9H8M1 238 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 DEPPQ9NTK1 212 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 TBC1D23Q9NUY8 699 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 FBXL2Q9UKC9 423 aa22.52■■□□□ 1.2
RFX1-205ENST00000589239 PCNX3Q9H6A9 2034 aa22.52■■□□□ 1.19
RFX1-205ENST00000589239 IGLV3-32A0A0A0MS00 114 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 A0A1W2PRQ8 180 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 G3V2T6 193 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 FPR1P21462 350 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 MASP1P48740 699 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 HMGA2P52926 109 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 DGCR6Q14129 220 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 ZDHHC13Q8IUH4 622 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 NKAIN4Q8IVV8 208 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 OR5K1Q8NHB7 308 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 GPR119Q8TDV5 335 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 ZCCHC14Q8WYQ9 949 aaKnown RBP22.51■■□□□ 1.19
RFX1-205ENST00000589239 NR4A3Q92570 626 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 COX4I2Q96KJ9 171 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 POLR2J2Q9GZM3 115 aaKnown RBP22.51■■□□□ 1.19
RFX1-205ENST00000589239 RNF32Q9H0A6 362 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 POLR2J3Q9H1A7 115 aaKnown RBP22.51■■□□□ 1.19
RFX1-205ENST00000589239 SNX4O95219 450 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 PGCP20142 388 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 PRKACGP22612 351 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 ALG10BQ5I7T1 473 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 OTUD3Q5T2D3 398 aaPredicted RBP22.51■■□□□ 1.19
RFX1-205ENST00000589239 SHQ1Q6PI26 577 aaKnown RBP22.51■■□□□ 1.19
RFX1-205ENST00000589239 GPR141Q7Z602 305 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 MDS2Q8NDY4 140 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 KLHL1Q9NR64 748 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 INIPQ9NRY2 104 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 RPS6KB2Q9UBS0 482 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 CSAG2Q9Y5P2 127 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 ZZEF1O43149 2961 aa22.51■■□□□ 1.19
RFX1-205ENST00000589239 PTPRQQ9UMZ3 2332 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 PTNP21246 168 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 LSM11P83369 360 aaKnown RBP eCLIP22.5■■□□□ 1.19
RFX1-205ENST00000589239 SEC23BQ15437 767 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 WBP2NLQ6ICG8 309 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 IGFL2Q6UWQ7 119 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 ARSKQ6UWY0 536 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 STK32CQ86UX6 486 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 PLCZ1Q86YW0 608 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 CBR4Q8N4T8 237 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 OR2M3Q8NG83 312 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 ISOC1Q96CN7 298 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 GNRHR2Q96P88 292 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 ANKRD60Q9BZ19 345 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.5■■□□□ 1.19
RFX1-205ENST00000589239 PDP1Q9P0J1 537 aaPredicted RBP22.5■■□□□ 1.19
RFX1-205ENST00000589239 ITGB1BP2Q9UKP3 347 aa22.5■■□□□ 1.19
RFX1-205ENST00000589239 A0A087WV48 116 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 ANKUB1A6NFN9 424 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 TRIM64CA6NLI5 447 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 FAAHO00519 579 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 SOCS2O14508 198 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 CDK2AP1O14519 115 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 LYPD3O95274 346 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 ARHGDIAP52565 204 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 UCNP55089 124 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 SMIM11AP58511 58 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 ESRRGP62508 458 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 TRAM2Q15035 370 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 QPRTQ15274 297 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 DCST1Q5T197 706 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 WDR88Q6ZMY6 472 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 ZBTB49Q6ZSB9 765 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 SVOPLQ8N434 492 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 FADS6Q8N9I5 356 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 BORCS5Q969J3 196 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 C3orf49Q96BT1 292 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 TMEM41AQ96HV5 264 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 SMAD5Q99717 465 aaKnown RBP22.49■■□□□ 1.19
RFX1-205ENST00000589239 SLC29A1Q99808 456 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 PRSS27Q9BQR3 290 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 SNPHO15079 494 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 TRIM3O75382 744 aaPredicted RBP22.49■■□□□ 1.19
RFX1-205ENST00000589239 WISP1O95388 367 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 ZNF12P17014 697 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 CNR1P21554 472 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 MSX1P28360 303 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 ZBED5Q49AG3 693 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 PODNL1Q6PEZ8 512 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 ULK3Q6PHR2 472 aa22.49■■□□□ 1.19
RFX1-205ENST00000589239 OR4K17Q8NGC6 315 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms