RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 CLDN16Q9Y5I7 305 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 SPIN1Q9Y657 262 aaPredicted RBP9.17□□□□□ -0.94
VPS25-202ENST00000589219 ADAMTS20P59510 1910 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 PKD1L2Q7Z442 2459 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 IGHV5-51A0A0C4DH38 117 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 IQCMA0A1B0GVH7 501 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 RIIAD1A6NNX1 92 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 POLR1CO15160 346 aaPredicted RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 NUDT21O43809 227 aaKnown RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 NTN1O95631 604 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 LDOC1O95751 146 aaPredicted RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 IGF2P01344 180 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 IGKV1D-16P01601 117 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 ZGLP1P0C6A0 271 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 MSL3P1P0C860 447 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 LIMS3P0CW19 117 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 LIMS4P0CW20 117 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 SAGP10523 405 aaPredicted RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 ZNF3P17036 446 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 MAKP20794 623 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 TBXA2RP21731 343 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 GALP22466 123 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 CD1CP29017 333 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 SLC9A3P48764 834 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 ARL4DP49703 201 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 RORCP51449 518 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 RPS3AP61247 264 aaKnown RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 GPLD1P80108 840 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 RUNX1T1Q06455 604 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 KRR1Q13601 381 aaKnown RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 DOC2BQ14184 412 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 SOWAHCQ53LP3 525 aaPredicted RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 SPANXN2Q5MJ10 180 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 LIPKQ5VXJ0 399 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 ULK3Q6PHR2 472 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 PAQR6Q6TCH4 344 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 PLEKHG7Q6ZR37 379 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 BTLAQ7Z6A9 289 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 PLXDC1Q8IUK5 500 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 CACTIN-AS1Q8N1I8 211 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 ZNF615Q8N8J6 731 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 ZNF527Q8NB42 609 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 C16orf52Q8NHV5 167 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 RNF217Q8TC41 542 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 SLC2A12Q8TD20 617 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 GRHL3Q8TE85 626 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 DNAJA4Q8WW22 397 aaPredicted RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 ART5Q96L15 291 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 CEP19Q96LK0 163 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 WDFY2Q96P53 400 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 ARHGAP9Q9BRR9 750 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 CCDC32Q9BV29 185 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 SLC19A3Q9BZV2 496 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 OR10A5Q9H207 317 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 RNF167Q9H6Y7 350 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 SP140LQ9H930 580 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 MKKSQ9NPJ1 570 aaPredicted RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 HINT3Q9NQE9 182 aaKnown RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 CUTCQ9NTM9 273 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 SEMA5BQ9P283 1151 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 DKK4Q9UBT3 224 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 MRTO4Q9UKD2 239 aaKnown RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 RALYQ9UKM9 306 aaKnown RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 SIGLEC7Q9Y286 467 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 CAB39Q9Y376 341 aaPredicted RBP9.16□□□□□ -0.94
VPS25-202ENST00000589219 OR10H1Q9Y4A9 318 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 UGT2A1Q9Y4X1 527 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 RNF215Q9Y6U7 377 aa9.16□□□□□ -0.94
VPS25-202ENST00000589219 CCDC88CQ9P219 2028 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 NBEAQ8NFP9 2946 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 ACACAQ13085 2346 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 KNTC1P50748 2209 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 IGHV1OR21-1A0A087WYE8 117 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 FRG2CA6NGY1 282 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 SERINC4A6NH21 518 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 MAGEB3O15480 346 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 PPM1BO75688 479 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 CDC123O75794 336 aaPredicted RBP9.15□□□□□ -0.94
VPS25-202ENST00000589219 OR2B3O76000 313 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 SNX4O95219 450 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 CH25HO95992 272 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 CLPSP04118 112 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 IFNA16P05015 189 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 CT45A8P0DMV1 189 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 CT45A9P0DMV2 189 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 ADH7P40394 386 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 ACAA2P42765 397 aaKnown RBP9.15□□□□□ -0.94
VPS25-202ENST00000589219 RFX3P48380 749 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 BCAP31P51572 246 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 PGDP52209 483 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 FXYD6P3P58550 94 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 DCAF7P61962 342 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 ACTC1P68032 377 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 ACTA1P68133 377 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 PSPHP78330 225 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 HSD11B2P80365 405 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 POU4F2Q12837 409 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 CCDC157Q569K6 752 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 CT45A2Q5DJT8 189 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 ALG10BQ5I7T1 473 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms