RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 TMEM234Q8WY98 164 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 FAM46AQ96IP4 442 aaKnown RBP20.27■□□□□ 0.84
ATG4D-209ENST00000588857 KLHDC3Q9BQ90 382 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 GABARAPL3Q9BY60 117 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 ANKRD60Q9BZ19 345 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 ING2Q9H160 280 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 TAS2R10Q9NYW0 307 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 CNTRLQ7Z7A1 2325 aa20.27■□□□□ 0.83
ATG4D-209ENST00000588857 MPDZO75970 2070 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 CFAP47Q6ZTR5 3102 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 A0A087WUJ7 227 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 IGLV3-32A0A0A0MS00 114 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 A6NL46 340 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 GNB5O14775 395 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 PIP5K1CO60331 668 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 CDC40O60508 579 aaKnown RBP eCLIP20.26■□□□□ 0.83
ATG4D-209ENST00000588857 P04436 131 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 PTNP21246 168 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 TACR3P29371 465 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 POLR2IP36954 125 aaKnown RBP20.26■□□□□ 0.83
ATG4D-209ENST00000588857 OMPP47874 163 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 SOX8P57073 446 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 TOMM34Q15785 309 aaPredicted RBP20.26■□□□□ 0.83
ATG4D-209ENST00000588857 AGAP7PQ5VUJ5 663 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 FRMD6Q96NE9 622 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 AGAP4Q96P64 663 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 UTP23Q9BRU9 249 aaKnown RBP20.26■□□□□ 0.83
ATG4D-209ENST00000588857 ZNF426Q9BUY5 554 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 DPH1Q9BZG8 443 aa20.26■□□□□ 0.83
ATG4D-209ENST00000588857 LOC100130705A0A1B0GUX0 176 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 ANKRD33BA6NCL7 494 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 KPNA4O00629 521 aaPredicted RBP20.25■□□□□ 0.83
ATG4D-209ENST00000588857 MST1P26927 711 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 ALDH6A1Q02252 535 aaKnown RBP20.25■□□□□ 0.83
ATG4D-209ENST00000588857 CD300LDQ6UXZ3 194 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 MDGA2Q7Z553 956 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 ATG4DQ86TL0 474 aaPredicted RBP20.25■□□□□ 0.83
ATG4D-209ENST00000588857 CHERPQ8IWX8 916 aaKnown RBP20.25■□□□□ 0.83
ATG4D-209ENST00000588857 ZNF570Q96NI8 536 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 GRIP2Q9C0E4 1043 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 ADAM19Q9H013 955 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 C12orf10Q9HB07 376 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 SACM1LQ9NTJ5 587 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 LRFN1Q9P244 771 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 TMEM5Q9Y2B1 443 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 DSPP15924 2871 aaKnown RBP20.25■□□□□ 0.83
ATG4D-209ENST00000588857 SLC16A6O15403 523 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 SNX4O95219 450 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 GNAO1P09471 354 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 IFI30P13284 250 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 OSMP13725 252 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 ZNF41P51814 821 aaPredicted RBP20.25■□□□□ 0.83
ATG4D-209ENST00000588857 ESRRGP62508 458 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 PRKCDQ05655 676 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 TSPAN31Q12999 210 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 LINC00696Q6ZRV3 163 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 MEX3DQ86XN8 651 aaKnown RBP20.25■□□□□ 0.83
ATG4D-209ENST00000588857 MARVELD2Q8N4S9 558 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 OR4K17Q8NGC6 315 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 PFN4Q8NHR9 129 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 ST8SIA1Q92185 356 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 ZNF524Q96C55 264 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 DSN1Q9H410 356 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 PTGES2Q9H7Z7 377 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 GPR83Q9NYM4 423 aa20.25■□□□□ 0.83
ATG4D-209ENST00000588857 BCKDKO14874 412 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 CLIC3O95833 236 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 CXCR1P25024 350 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 FPR3P25089 353 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 CD96P40200 585 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 GPR4P46093 362 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 HTR3AP46098 478 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 GSSP48637 474 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 MASP1P48740 699 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 POLR2HP52434 150 aaKnown RBP20.24■□□□□ 0.83
ATG4D-209ENST00000588857 TPD52P55327 224 aaPredicted RBP20.24■□□□□ 0.83
ATG4D-209ENST00000588857 CTBP2P56545 445 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 RAPSNQ13702 412 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 PDK3Q15120 406 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 ISLR2Q6UXK2 745 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 GRINAQ7Z429 371 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 SPACA3Q8IXA5 215 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 PSD4Q8NDX1 1056 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 BPIFA2Q96DR5 249 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 GPA33Q99795 319 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 TIMMDC1Q9NPL8 285 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 REV1Q9UBZ9 1251 aa20.24■□□□□ 0.83
ATG4D-209ENST00000588857 FAM47E-STBD1D6RA91 191 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 H3BN98 237 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 CDK2AP1O14519 115 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 F10P00742 488 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 MYF6P23409 242 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 TUBA3CQ13748 450 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 KRT80Q6KB66 452 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 TUBA3EQ6PEY2 450 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 PLCZ1Q86YW0 608 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 WDSUB1Q8N9V3 476 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 OR2M3Q8NG83 312 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 MUS81Q96NY9 551 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 TMEM43Q9BTV4 400 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms