RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 ZSWIM7Q19AV6 140 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 RUNDC3AQ59EK9 446 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 C3orf33Q6P1S2 294 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 ZNF836Q6ZNA1 936 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 GRINAQ7Z429 371 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 RETREG3Q86VR2 466 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 BBS10Q8TAM1 723 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 STARD4Q96DR4 205 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 RBM24Q9BX46 236 aaKnown RBP17.2■□□□□ 0.34
CIRBP-217ENST00000588230 IKZF5Q9H5V7 419 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 ARMC7Q9H6L4 198 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 RLIMQ9NVW2 624 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 ZNF443Q9Y2A4 671 aaPredicted RBP17.2■□□□□ 0.34
CIRBP-217ENST00000588230 IFT52Q9Y366 437 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 MPDZO75970 2070 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 CDHR4A6H8M9 788 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 AP3D1O14617 1153 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 MSTNO14793 375 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 PGM3O95394 542 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 ARAFP10398 606 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 KIR2DL3P43628 341 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 CTBP2P56545 445 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 CDK6Q00534 326 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 SNTB1Q13884 538 aaKnown RBP17.19■□□□□ 0.34
CIRBP-217ENST00000588230 GTF2IRD2BQ6EKJ0 949 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 VWA1Q6PCB0 445 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 FAM214BQ7L5A3 538 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 BTLAQ7Z6A9 289 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 GTF2IRD2Q86UP8 949 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 NFKBIDQ8NI38 313 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 ROBO4Q8WZ75 1007 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 CPNE4Q96A23 557 aaPredicted RBP17.19■□□□□ 0.34
CIRBP-217ENST00000588230 ANKRD27Q96NW4 1050 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 ZNF317Q96PQ6 595 aaPredicted RBP17.19■□□□□ 0.34
CIRBP-217ENST00000588230 OR5B2Q96R09 309 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 CGREF1Q99674 301 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 ZNF559Q9BR84 538 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 CPPED1Q9BRF8 314 aaPredicted RBP17.19■□□□□ 0.34
CIRBP-217ENST00000588230 SAR1AQ9NR31 198 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 KCNN3Q9UGI6 736 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 EMC9Q9Y3B6 208 aa17.19■□□□□ 0.34
CIRBP-217ENST00000588230 SPIN1Q9Y657 262 aaPredicted RBP17.19■□□□□ 0.34
CIRBP-217ENST00000588230 HRNRQ86YZ3 2850 aaPredicted RBP17.19■□□□□ 0.34
CIRBP-217ENST00000588230 A0A1W2PNR3 127 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 A8MXE2 369 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 ADAM11O75078 769 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 TFPIP10646 304 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 HTR3AP46098 478 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 EPS8Q12929 822 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 KLF10Q13118 480 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 ZNF311Q5JNZ3 666 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 RNF220Q5VTB9 566 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 REEP3Q6NUK4 255 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 C10orf111Q8N326 155 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 CLIP4Q8N3C7 705 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 SLC25A43Q8WUT9 341 aaPredicted RBP17.18■□□□□ 0.34
CIRBP-217ENST00000588230 GMPPAQ96IJ6 420 aaPredicted RBP17.18■□□□□ 0.34
CIRBP-217ENST00000588230 CCDC106Q9BWC9 280 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 SPATA9Q9BWV2 254 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 SRXN1Q9BYN0 137 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 COQ10BQ9H8M1 238 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 CTPS2Q9NRF8 586 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 GLRX2Q9NS18 164 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 CHRNA9Q9UGM1 479 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 CLEC4AQ9UMR7 237 aa17.18■□□□□ 0.34
CIRBP-217ENST00000588230 TEP1Q99973 2627 aaKnown RBP17.18■□□□□ 0.34
CIRBP-217ENST00000588230 ENO4A6NNW6 628 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 FAAHO00519 579 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 GKN3PP0CG01 181 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 ETS2P15036 469 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 SLC6A2P23975 617 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 RAC3P60763 192 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 MAPRE2Q15555 327 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 ZNF239Q16600 458 aaKnown RBP17.17■□□□□ 0.34
CIRBP-217ENST00000588230 SYT14P1Q58G82 188 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 ZNF550Q7Z398 422 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 KRT73Q86Y46 540 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 TMEM38AQ9H6F2 299 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 GALNT8Q9NY28 637 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 PROCRQ9UNN8 238 aa17.17■□□□□ 0.34
CIRBP-217ENST00000588230 TUBAL3A6NHL2 446 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 SS18L1O75177 396 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-217ENST00000588230 CCNA2P20248 432 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 FKBP2P26885 142 aaKnown RBP17.16■□□□□ 0.34
CIRBP-217ENST00000588230 TACR3P29371 465 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 ADSLP30566 484 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-217ENST00000588230 CPOXP36551 454 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 SLC1A3P43003 542 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 POLR2HP52434 150 aaKnown RBP17.16■□□□□ 0.34
CIRBP-217ENST00000588230 MTPNP58546 118 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 COPZ1P61923 177 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 SORDQ00796 357 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 CYLC2Q14093 348 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-217ENST00000588230 SCARB2Q14108 478 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 RNPS1Q15287 305 aaKnown RBP17.16■□□□□ 0.34
CIRBP-217ENST00000588230 GUSBP1Q15486 140 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 CYP51A1Q16850 503 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 MMEL1Q495T6 779 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 FCRLAQ7L513 359 aa17.16■□□□□ 0.34
CIRBP-217ENST00000588230 ADGRG3Q86Y34 549 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms