RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 C9JVG2 144 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 E9PBE3 544 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 CNOT4O95628 575 aaKnown RBP16.64■□□□□ 0.25
TRIM47-205ENST00000587774 ALDOCP09972 364 aaKnown RBP16.64■□□□□ 0.25
TRIM47-205ENST00000587774 LBPP18428 481 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 DIO1P49895 249 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 CLNS1AP54105 237 aaKnown RBP16.64■□□□□ 0.25
TRIM47-205ENST00000587774 PLAURQ03405 335 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 ITGADQ13349 1161 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 P2RY6Q15077 328 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 DPY19L1Q2PZI1 675 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 FAM174BQ3ZCQ3 159 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 SYT14P1Q58G82 188 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 TNFAIP8L3Q5GJ75 292 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 NCMAPQ5T1S8 102 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 LRRC34Q8IZ02 419 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 VPS37AQ8NEZ2 397 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 LILRB1Q8NHL6 650 aaPredicted RBP16.64■□□□□ 0.25
TRIM47-205ENST00000587774 ARL8AQ96BM9 186 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 ZNF775Q96BV0 537 aaPredicted RBP16.64■□□□□ 0.25
TRIM47-205ENST00000587774 NEURL3Q96EH8 262 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 SLC35A5Q9BS91 424 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 PARD6BQ9BYG5 372 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 SAP130Q9H0E3 1048 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 ESRP2Q9H6T0 727 aaKnown RBP16.64■□□□□ 0.25
TRIM47-205ENST00000587774 MEAF6Q9HAF1 191 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 POLE3Q9NRF9 147 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 SERINC1Q9NRX5 453 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 ACER3Q9NUN7 267 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 PNPOQ9NVS9 261 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 MARCOQ9UEW3 520 aaPredicted RBP16.64■□□□□ 0.25
TRIM47-205ENST00000587774 SLC35A3Q9Y2D2 325 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 ABCA1O95477 2261 aa16.64■□□□□ 0.25
TRIM47-205ENST00000587774 PRAMEF27A3QJZ7 478 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 CLOCKO15516 846 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 LYZL6O75951 148 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 GUSBP08236 651 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 CHI3L1P36222 383 aaPredicted RBP16.63■□□□□ 0.25
TRIM47-205ENST00000587774 BST1Q10588 318 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 STX3Q13277 289 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 CAPRIN1Q14444 709 aaKnown RBP16.63■□□□□ 0.25
TRIM47-205ENST00000587774 CEP85LQ5SZL2 805 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 ABLIM2Q6H8Q1 611 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 ADAM5Q6NVV9 412 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 BHLHA15Q7RTS1 189 aaPredicted RBP16.63■□□□□ 0.25
TRIM47-205ENST00000587774 LSRQ86X29 649 aaPredicted RBP16.63■□□□□ 0.25
TRIM47-205ENST00000587774 KIRREL3Q8IZU9 778 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 SLC25A43Q8WUT9 341 aaPredicted RBP16.63■□□□□ 0.25
TRIM47-205ENST00000587774 OIT3Q8WWZ8 545 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 HSD17B8Q92506 261 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 ZNF75CPQ92670 426 aaPredicted RBP16.63■□□□□ 0.25
TRIM47-205ENST00000587774 FBXW5Q969U6 566 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 ZG16BQ96DA0 208 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 DNAJA3Q96EY1 480 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 TEX37Q96LM6 180 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 CCDC106Q9BWC9 280 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 LAMP3Q9UQV4 416 aa16.63■□□□□ 0.25
TRIM47-205ENST00000587774 CLDN24A6NM45 220 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 ZNF724A8MTY0 619 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 SULT2B1O00204 365 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 TMCC2O75069 709 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 CD3EP07766 207 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 COX5AP20674 150 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 RYKP34925 604 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 ATP5J2P56134 94 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 NME5P56597 212 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 CSNK2A1P68400 391 aaPredicted RBP16.62■□□□□ 0.25
TRIM47-205ENST00000587774 HPCAP84074 193 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 BSPH1Q075Z2 132 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 STK11Q15831 433 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 GPAT3Q53EU6 434 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 OGFOD2Q6N063 350 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 TMPPEQ6ZT21 453 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 KBTBD8Q8NFY9 601 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 ZNF563Q8TA94 476 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 NEUROG1Q92886 237 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 CCDC115Q96NT0 180 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 KCNK9Q9NPC2 374 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 NGBQ9NPG2 151 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 CTPS2Q9NRF8 586 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 CHRNA9Q9UGM1 479 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 ARFGEF3Q5TH69 2177 aa16.62■□□□□ 0.25
TRIM47-205ENST00000587774 CUBNO60494 3623 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 HMGN4O00479 90 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 SDHDO14521 159 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 ADAM11O75078 769 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 TFPIP10646 304 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 IGHV1-2P23083 117 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 S100A3P33764 101 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 UFM1P61960 85 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 RPS4XP62701 263 aaKnown RBP16.61■□□□□ 0.25
TRIM47-205ENST00000587774 CHRNEQ04844 493 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 AP1ARQ63HQ0 302 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 RNF130Q86XS8 419 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 PIWIL2Q8TC59 973 aaKnown RBP16.61■□□□□ 0.25
TRIM47-205ENST00000587774 ARL5BQ96KC2 179 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 PAIP2Q9BPZ3 127 aaKnown RBP16.61■□□□□ 0.25
TRIM47-205ENST00000587774 USB1Q9BQ65 265 aaKnown RBP16.61■□□□□ 0.25
TRIM47-205ENST00000587774 EXOSC3Q9NQT5 275 aaKnown RBP16.61■□□□□ 0.25
TRIM47-205ENST00000587774 AIG1Q9NVV5 245 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms