RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 A0A1W2PP55 124 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 E9PI62 339 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 SHOXO15266 292 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 PLRG1O43660 514 aaKnown RBP17.17■□□□□ 0.34
DDX39A-206ENST00000587730 BRINP1O60477 761 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 SLC22A5O76082 557 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 IFNA7P01567 189 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 RAF1P04049 648 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 H2AFB2P0C5Z0 115 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 EPXP11678 715 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 DRD5P21918 477 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 IGFALSP35858 605 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 OR10A3P58181 314 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 KIAA1024LP59773 190 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 ILF3Q12906 894 aaKnown RBP eCLIP17.17■□□□□ 0.34
DDX39A-206ENST00000587730 UBE2NLQ5JXB2 153 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 SIGIRRQ6IA17 410 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 IL20RBQ6UXL0 311 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 OR4E2Q8NGC2 313 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 SMIM4Q8WVI0 70 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 BADQ92934 168 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 FAM131CQ96AQ9 280 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 OR2A5Q96R48 311 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 CNN2Q99439 309 aaKnown RBP17.17■□□□□ 0.34
DDX39A-206ENST00000587730 FBRSQ9HAH7 460 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 ZFP64Q9NPA5 681 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 SCP2D1Q9UJQ7 156 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 PCOLCE2Q9UKZ9 415 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 AUP1Q9Y679 476 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 MYO10Q9HD67 2058 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 MEIKINA0A087WXM9 373 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 A0A0B4J2E0 115 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 A0A1B0GX12 115 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 DVL2O14641 736 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 TPPPO94811 219 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 SULT1A3P0DMM9 295 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 SULT1A4P0DMN0 295 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 NT5EP21589 574 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 GJA4P35212 333 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 OR12D2P58182 307 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 CRMP1Q14194 572 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 CDK5R1Q15078 307 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 FAAH2Q6GMR7 532 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 THSD4Q6ZMP0 1018 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 SIAH3Q8IW03 269 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 FAM98AQ8NCA5 519 aaKnown RBP17.17■□□□□ 0.34
DDX39A-206ENST00000587730 OR11H7Q8NGC8 314 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 PHOSPHO2Q8TCD6 241 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 THAP4Q8WY91 577 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 ZNF426Q9BUY5 554 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 TWSG1Q9GZX9 223 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 CLEC4MQ9H2X3 399 aaPredicted RBP17.17■□□□□ 0.34
DDX39A-206ENST00000587730 PLEKHA1Q9HB21 404 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 ADAP2Q9NPF8 381 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 PLEKHM1Q9Y4G2 1056 aa17.17■□□□□ 0.34
DDX39A-206ENST00000587730 TRAV6A0A075B6T7 132 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 A0A1W2PQU0 124 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 ZC3H12DA2A288 527 aaKnown RBP17.16■□□□□ 0.34
DDX39A-206ENST00000587730 SMLR1H3BR10 107 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 BTN3A3O00478 584 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 GPR75O95800 540 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 GKN3PP0CG01 181 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 MAP3K8P41279 467 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 GDI2P50395 445 aaKnown RBP17.16■□□□□ 0.34
DDX39A-206ENST00000587730 SIM1P81133 766 aaPredicted RBP17.16■□□□□ 0.34
DDX39A-206ENST00000587730 MRPS10P82664 201 aaKnown RBP17.16■□□□□ 0.34
DDX39A-206ENST00000587730 RPL6Q02878 288 aaKnown RBP17.16■□□□□ 0.34
DDX39A-206ENST00000587730 SNTB2Q13425 540 aaKnown RBP17.16■□□□□ 0.34
DDX39A-206ENST00000587730 DEFB134Q4QY38 66 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 CEP78Q5JTW2 689 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 SLC35D3Q5M8T2 416 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 FBXO42Q6P3S6 717 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 C17orf47Q8NEP4 570 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 FGF13Q92913 245 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 BRD7Q9NPI1 651 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 NRIP3Q9NQ35 241 aa17.16■□□□□ 0.34
DDX39A-206ENST00000587730 PRSS38A1L453 326 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 SULT1B1O43704 296 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 GIFP27352 417 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 SIRPAP78324 504 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 RUNX2Q13950 521 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 GSG1Q2KHT4 349 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 ISXQ2M1V0 245 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 SLC25A35Q3KQZ1 300 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 CDONQ4KMG0 1287 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 TRMT12Q53H54 448 aaKnown RBP17.15■□□□□ 0.34
DDX39A-206ENST00000587730 FAM209AQ5JX71 171 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 FAM27D1Q5T7N8 215 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 PSRC1Q6PGN9 363 aaPredicted RBP17.15■□□□□ 0.34
DDX39A-206ENST00000587730 LYPD8Q6UX82 237 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 LSMEM1Q8N8F7 131 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 RERGQ96A58 199 aaPredicted RBP17.15■□□□□ 0.34
DDX39A-206ENST00000587730 ENKD1Q9H0I2 346 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 SYNPO2LQ9H987 977 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 NUMA1Q14980 2115 aa17.15■□□□□ 0.34
DDX39A-206ENST00000587730 CENPVL1A0A0U1RR11 272 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 GXYLT2A0PJZ3 443 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 TUBAL3A6NHL2 446 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 LEUTXA8MZ59 168 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 PPP1R3DO95685 299 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms