RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 FOXD4Q12950 439 aaPredicted RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 MICAQ29983 383 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 LIN52Q52LA3 116 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 RBM48Q5RL73 367 aaKnown RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 KDM4DQ6B0I6 523 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 ZNF585AQ6P3V2 769 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 DHRS4L2Q6PKH6 230 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 FAM111BQ6SJ93 734 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 QSOX2Q6ZRP7 698 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 USP51Q70EK9 711 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 VASH1Q7L8A9 365 aaPredicted RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 THAP5Q7Z6K1 395 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 GALNT10Q86SR1 603 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 TGIF2LYQ8IUE0 185 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 CYP4Z2PQ8N1L4 340 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 ZNF619Q8N2I2 560 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 PARP8Q8N3A8 854 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 ZNF321PQ8N8H1 164 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 COX18Q8N8Q8 333 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 APCDD1LQ8NCL9 501 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 TMEM52Q8NDY8 209 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 OR7G2Q8NG99 324 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 OR7G1Q8NGA0 311 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 OR10G2Q8NGC3 310 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 OR5M3Q8NGP4 307 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 OR10Q1Q8NGQ4 319 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 HOXB13Q92826 284 aaPredicted RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 KAT2AQ92830 837 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 RIT1Q92963 219 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 SLC35B4Q969S0 331 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 GIMAP5Q96F15 307 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 OTUB1Q96FW1 271 aaPredicted RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 DHRS1Q96LJ7 313 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 PRRC1Q96M27 445 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 G6PC3Q9BUM1 346 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 GABARAPL3Q9BY60 117 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 DEFB126Q9BYW3 111 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 TOR3AQ9H497 397 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 SERHL2Q9H4I8 314 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 KCNJ16Q9NPI9 418 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 EQTNQ9NQ60 294 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 PNO1Q9NRX1 252 aaKnown RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 DNAJB12Q9NXW2 375 aaKnown RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 MAT2BQ9NZL9 334 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 ACAD8Q9UKU7 415 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 KLF13Q9Y2Y9 288 aaPredicted RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 WDR45Q9Y484 360 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 FAM215AQ9Y5M1 114 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 LYVE1Q9Y5Y7 322 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 U3KQV3 271 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 ABCA4P78363 2273 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 DNAJC13O75165 2243 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 A0A087WXM4 84 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 IGKV3D-11A0A0A0MRZ8 115 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 A0A0G2JNJ9 132 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 LOC100130705A0A1B0GUX0 176 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 A0A1W2PRQ8 180 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 TCRBV16S1A1N1A0A5B0 115 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 TMEM200CA6NKL6 621 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 H3BNH8 94 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 AP3D1O14617 1153 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 BCKDKO14874 412 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 MPZL2O60487 215 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 ZNF354AO60765 605 aaPredicted RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 MRPS14O60783 128 aaKnown RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 SMNDC1O75940 238 aaKnown RBP eCLIP7.13□□□□□ -1.27
VMP1-204ENST00000587259 OR2J2O76002 312 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 OR6B1O95007 311 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 LGI1O95970 557 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 C1QCP02747 245 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 CHRM4P08173 479 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 HOXD4P09016 255 aaPredicted RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 LCN1P31025 176 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 TTKP33981 857 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 TRHRP34981 398 aaPredicted RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 RPL5P46777 297 aaKnown RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 CDH12P55289 794 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 GABARAPL2P60520 117 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 ESRRGP62508 458 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 PPIAP62937 165 aaKnown RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 POU6F2P78424 691 aaPredicted RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 PLGLB1Q02325 96 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 TEKQ02763 1124 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 DUSP2Q05923 314 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 ZNF155Q12901 538 aaPredicted RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 DUSP8Q13202 625 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 DGCR6Q14129 220 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 LTB4RQ15722 352 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 SYPL1Q16563 259 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 DUSP7Q16829 419 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 ZNF750Q32MQ0 723 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 GXYLT1Q4G148 440 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 IQCCQ4KMZ1 466 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 ZNF311Q5JNZ3 666 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 RPS26P11Q5JNZ5 115 aaPredicted RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 EXOSC6Q5RKV6 272 aaKnown RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 DCST1Q5T197 706 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 DCST2Q5T1A1 773 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 RNF220Q5VTB9 566 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 AP1ARQ63HQ0 302 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms